RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 STARD7Q9NQZ5 370 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 SORBS3O60504 671 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 KPNA6O60684 536 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 PURAQ00577 322 aaKnown RBP23.07■■□□□ 1.28
PTCD3-202ENST00000409326 HSDL1Q3SXM5 330 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 PRR16Q569H4 304 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 NEK8Q86SG6 692 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 LENG9Q96B70 501 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 INTS4Q96HW7 963 aaKnown RBP23.07■■□□□ 1.28
PTCD3-202ENST00000409326 PKD2L1Q9P0L9 805 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 NFASCO94856 1347 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 ELP1O95163 1332 aa23.07■■□□□ 1.28
PTCD3-202ENST00000409326 CYP3A7-CYP3A51PA0A087WV96 503 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 MYL3P08590 195 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 HOXD8P13378 290 aaPredicted RBP23.06■■□□□ 1.28
PTCD3-202ENST00000409326 CYP3A7P24462 503 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 SNX17Q15036 470 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 DGKDQ16760 1214 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 SLC39A5Q6ZMH5 540 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 FOXP1Q9H334 677 aaPredicted RBP23.06■■□□□ 1.28
PTCD3-202ENST00000409326 WDR81Q562E7 1941 aa23.06■■□□□ 1.28
PTCD3-202ENST00000409326 FAM205CA6NFA0 338 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 TDP2O95551 362 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 ATN1P54259 1190 aaPredicted RBP23.05■■□□□ 1.28
PTCD3-202ENST00000409326 LRRC26Q2I0M4 334 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 Q4G0T1 1027 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 C1orf53Q5VUE5 145 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 MBOAT7Q96N66 472 aa23.05■■□□□ 1.28
PTCD3-202ENST00000409326 MTG1Q9BT17 334 aaPredicted RBP23.05■■□□□ 1.28
PTCD3-202ENST00000409326 NOP56O00567 594 aaKnown RBP23.04■■□□□ 1.28
PTCD3-202ENST00000409326 PPFIA4O75335 1185 aa23.04■■□□□ 1.28
PTCD3-202ENST00000409326 ITGB3BPQ13352 177 aaPredicted RBP23.04■■□□□ 1.28
PTCD3-202ENST00000409326 LETM2Q2VYF4 491 aa23.04■■□□□ 1.28
PTCD3-202ENST00000409326 GPR20Q99678 358 aa23.04■■□□□ 1.28
PTCD3-202ENST00000409326 SDF4Q9BRK5 362 aa23.04■■□□□ 1.28
PTCD3-202ENST00000409326 ZNF577Q9BSK1 485 aa23.04■■□□□ 1.28
PTCD3-202ENST00000409326 JPH1Q9HDC5 661 aaPredicted RBP23.04■■□□□ 1.28
PTCD3-202ENST00000409326 A0A0U1RQG5 324 aaPredicted RBP23.03■■□□□ 1.28
PTCD3-202ENST00000409326 IPO5O00410 1097 aaKnown RBP23.03■■□□□ 1.28
PTCD3-202ENST00000409326 GCFC2P16383 781 aaKnown RBP23.03■■□□□ 1.28
PTCD3-202ENST00000409326 PPP4R3AQ6IN85 833 aa23.03■■□□□ 1.28
PTCD3-202ENST00000409326 VTI1AQ96AJ9 217 aa23.03■■□□□ 1.28
PTCD3-202ENST00000409326 NAP1L4Q99733 375 aaKnown RBP23.03■■□□□ 1.28
PTCD3-202ENST00000409326 MSH4O15457 936 aa23.02■■□□□ 1.28
PTCD3-202ENST00000409326 SP4Q02446 784 aa23.02■■□□□ 1.28
PTCD3-202ENST00000409326 GNL2Q13823 731 aaKnown RBP23.02■■□□□ 1.28
PTCD3-202ENST00000409326 SLC9A2Q9UBY0 812 aa23.02■■□□□ 1.28
PTCD3-202ENST00000409326 DDX25Q9UHL0 483 aaKnown RBP23.02■■□□□ 1.28
PTCD3-202ENST00000409326 TELO2Q9Y4R8 837 aa23.02■■□□□ 1.28
PTCD3-202ENST00000409326 MYH9P35579 1960 aaKnown RBP23.01■■□□□ 1.27
PTCD3-202ENST00000409326 KIF28PB7ZC32 967 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 H3BQV1 296 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 DHX15O43143 795 aaKnown RBP23.01■■□□□ 1.27
PTCD3-202ENST00000409326 CCNT1O60563 726 aaKnown RBP23.01■■□□□ 1.27
PTCD3-202ENST00000409326 F2P00734 622 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 ZNF286BP0CG31 522 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 U2AF2P26368 475 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTCD3-202ENST00000409326 RTP1P59025 263 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 ITGA7Q13683 1181 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 LARP1BQ659C4 914 aaKnown RBP23.01■■□□□ 1.27
PTCD3-202ENST00000409326 NOSTRINQ8IVI9 506 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 DPF3Q92784 378 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 SEZ6LQ9BYH1 1024 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 TBC1D22BQ9NU19 505 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 GRIN2DO15399 1336 aa23.01■■□□□ 1.27
PTCD3-202ENST00000409326 ARVCFO00192 962 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 SLC37A4O43826 429 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 PSMC6P62333 389 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 TRIM60Q495X7 471 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 SLC43A3Q8NBI5 491 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 KAT2BQ92831 832 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 KATNAL1Q9BW62 490 aa23■■□□□ 1.27
PTCD3-202ENST00000409326 KAT6AQ92794 2004 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 GSTTP1A0A1W2PQM5 241 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 EVI5O60447 810 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 LGALS2P05162 132 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 PDCP20941 246 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 CDK7P50613 346 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 ETNPPLQ8TBG4 499 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 SEPT1Q8WYJ6 367 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 SLC5A5Q92911 643 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 UIMC1Q96RL1 719 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 C16orf70Q9BSU1 422 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 ATP11BQ9Y2G3 1177 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 MROH7Q68CQ1 1323 aa22.99■■□□□ 1.27
PTCD3-202ENST00000409326 DDX39AO00148 427 aaKnown RBP22.98■■□□□ 1.27
PTCD3-202ENST00000409326 TCF7P36402 384 aaPredicted RBP22.98■■□□□ 1.27
PTCD3-202ENST00000409326 ACTR2P61160 394 aa22.98■■□□□ 1.27
PTCD3-202ENST00000409326 ANKRD33Q7Z3H0 272 aa22.98■■□□□ 1.27
PTCD3-202ENST00000409326 RIT2Q99578 217 aa22.98■■□□□ 1.27
PTCD3-202ENST00000409326 FOXD4L1Q9NU39 408 aa22.98■■□□□ 1.27
PTCD3-202ENST00000409326 HAS3O00219 553 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 WNT7AO00755 349 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 CCNE2O96020 404 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 PSEN2P49810 448 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 KRT76Q01546 638 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 NBPF20Q3BBV1 942 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 LRCH2Q5VUJ6 765 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 MCTP1Q6DN14 999 aa22.97■■□□□ 1.27
PTCD3-202ENST00000409326 ZNF746Q6NUN9 644 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms