RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 SENP7Q9BQF6 1050 aa17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 AP5M1Q9H0R1 490 aa17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 ZSCAN16Q9H4T2 348 aaPredicted RBP17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 TELO2Q9Y4R8 837 aa17.15■□□□□ 0.34
SNRNP27-202ENST00000409116 FRMPD3Q5JV73 1810 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 DDX39AO00148 427 aaKnown RBP17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 BEX3Q00994 111 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 NEDD9Q14511 834 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 SLC5A5Q92911 643 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 TMEM106CQ9BVX2 250 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 KCNMB3Q9NPA1 279 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 DOCK5Q9H7D0 1870 aa17.14■□□□□ 0.33
SNRNP27-202ENST00000409116 CTAGE5O15320 804 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 DHX15O43143 795 aaKnown RBP17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 ADAMTS4O75173 837 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 GJA9P57773 515 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 CALCRLQ16602 461 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 FSCN1Q16658 493 aaKnown RBP17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 HAS1Q92839 578 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 SDF4Q9BRK5 362 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 OGDHLQ9ULD0 1010 aa17.13■□□□□ 0.33
SNRNP27-202ENST00000409116 NFASCO94856 1347 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 MARCH6O60337 910 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 GAS7O60861 476 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 SGPL1O95470 568 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 GJA8P48165 433 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 LRRC41Q15345 812 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 LRCH2Q5VUJ6 765 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 GIMAP8Q8ND71 665 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 Q9Y3F1 56 aa17.12■□□□□ 0.33
SNRNP27-202ENST00000409116 PSMD10O75832 226 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 CCNE2O96020 404 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 PTGDRQ13258 359 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 KLHDC9Q8NEP7 349 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 RIT2Q99578 217 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
SNRNP27-202ENST00000409116 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 A6NJR5 290 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 CCDC85CA6NKD9 419 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 NOP56O00567 594 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 TBX3O15119 743 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 CHMP2AO43633 222 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 MMP3P08254 477 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 TXKP42681 527 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 CPT1AP50416 773 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 NUCB2P80303 420 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 RNF180Q86T96 592 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 USP28Q96RU2 1077 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 GPR20Q99678 358 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 TFIP11Q9UBB9 837 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
SNRNP27-202ENST00000409116 EN2P19622 333 aaPredicted RBP17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 SOX10P56693 466 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 ACTR2P61160 394 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 NKX3-2P78367 333 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 KCNA10Q16322 511 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
SNRNP27-202ENST00000409116 ELP1O95163 1332 aa17.08■□□□□ 0.33
SNRNP27-202ENST00000409116 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.32
SNRNP27-202ENST00000409116 MYL3P08590 195 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms