RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NLGN2Q8NFZ4 835 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 CHMP4AQ9BY43 222 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 BTG4Q9NY30 223 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 LMCD1Q9NZU5 365 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 MARCH2Q9P0N8 246 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZNF180Q9UJW8 692 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 SPO11Q9Y5K1 396 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 MRFAP1Q9Y605 127 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 X6R8D5 127 aa6.25□□□□□ -1.41
HMGB3P18-201ENST00000406327 RFPL1O75677 317 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 ATF3P18847 181 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 KRT85P78386 507 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 CHRNEQ04844 493 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 IKZF1Q13422 519 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 PTPN21Q16825 1174 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 AOC3Q16853 763 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 OTOP3Q7RTS5 596 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 CABP7Q86V35 215 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 NLRP10Q86W26 655 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZZZ3Q8IYH5 903 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 TCEAL8Q8IYN2 117 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 USP33Q8TEY7 942 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 TSR2Q969E8 191 aaKnown RBP6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 PSMD1Q99460 953 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 TRIM8Q9BZR9 551 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 ACSS2Q9NR19 701 aa6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 PPARGC1AQ9UBK2 798 aaKnown RBP6.24□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZCCHC6Q5VYS8 1495 aaKnown RBP6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 C22orf46C9J442 243 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 KRT37O76014 449 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 MYBL2P10244 700 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 KRT15P19012 456 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 VCAM1P19320 739 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 GJA4P35212 333 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 GRIK1P39086 918 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 ERVK-21P61565 698 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 FAM102BQ5T8I3 360 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 CXorf57Q6NSI4 855 aaKnown RBP6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 ARHGAP36Q6ZRI8 547 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 RASSF3Q86WH2 238 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 AMOTL1Q8IY63 956 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 LZTR1Q8N653 840 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 ANKS4BQ8N8V4 417 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 JAM3Q9BX67 310 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 SMURF1Q9HCE7 757 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 GULP1Q9UBP9 304 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 GABBR1Q9UBS5 961 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZC3H7BQ9UGR2 993 aaKnown RBP6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 FBXL7Q9UJT9 491 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 TAF6LQ9Y6J9 622 aa6.23□□□□□ -1.41
HMGB3P18-201ENST00000406327 FADS2P1A8MWK0 482 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ABLIM3O94929 683 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 CYP17A1P05093 508 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 KRT18P05783 430 aaKnown RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 RECQLP46063 649 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TERF2Q15554 542 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ABCB5Q2M3G0 1257 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 HABP4Q5JVS0 413 aaKnown RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ANGEL2Q5VTE6 544 aaKnown RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 BROXQ5VW32 411 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 GALNT18Q6P9A2 607 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZPBP2Q6X784 338 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 SLCO6A1Q86UG4 719 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 OSTM1Q86WC4 334 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZDHHC13Q8IUH4 622 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 SPPL2CQ8IUH8 684 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 KIAA1958Q8N8K9 716 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 ZNF610Q8N9Z0 462 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TMEM52Q8NDY8 209 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 DPF3Q92784 378 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 FUBP3Q96I24 572 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TCF7L1Q9HCS4 588 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 SLC6A20Q9NP91 592 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 DSEQ9UL01 958 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 SRPK3Q9UPE1 567 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 LUC7L2Q9Y383 392 aaKnown RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 NOC2LQ9Y3T9 749 aaKnown RBP6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 TNKSO95271 1327 aa6.22□□□□□ -1.41
HMGB3P18-201ENST00000406327 A0A1W2PQJ5 194 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 CLASP2O75122 1294 aaKnown RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 FUCA1P04066 466 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZSCAN20P17040 1043 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 FPR2P25090 351 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 CD40P25942 277 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 GNALP38405 381 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 JAM2P57087 298 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 RTP1P59025 263 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 HDAC1Q13547 482 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLC14A2Q15849 920 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 GFOD2Q3B7J2 385 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 TMEM240Q5SV17 173 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 PNMA8AQ86V59 439 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 NME9Q86XW9 330 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms