RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 HOXA13P31271 388 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 ANP32AP39687 249 aaKnown RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 CNTN2Q02246 1040 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 ST3GAL1Q11201 340 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 AP3B2Q13367 1082 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 CCSAPQ6IQ19 270 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 IWS1Q96ST2 819 aa12.05□□□□□ -0.48
RPAIN-204ENST00000405578 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-204ENST00000405578 H3BQV1 296 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 ARVCFO00192 962 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 RFXAPO00287 272 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 MEIS2O14770 477 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 OPLAHO14841 1288 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-204ENST00000405578 TLL1O43897 1013 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 ASGR1P07306 291 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 C6orf222P0C671 652 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-204ENST00000405578 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
RPAIN-204ENST00000405578 GJB2P29033 226 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 PDE4DQ08499 809 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
RPAIN-204ENST00000405578 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 MAMDC4Q6UXC1 1216 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 SNX27Q96L92 541 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 UMODL1Q5DID0 1318 aa12.04□□□□□ -0.48
RPAIN-204ENST00000405578 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
RPAIN-204ENST00000405578 CST5P28325 142 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-204ENST00000405578 CCND2P30279 289 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 KRT2P35908 639 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-204ENST00000405578 STXBP2Q15833 593 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 UBE2SQ16763 222 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 KRT40Q6A162 431 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 XRRA1Q6P2D8 792 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 BLIDQ8IZY5 108 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PCSK9Q8NBP7 692 aaKnown RBP12.03□□□□□ -0.48
RPAIN-204ENST00000405578 DAGLBQ8NCG7 672 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 TAAR1Q96RJ0 339 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 CERS4Q9HA82 394 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PXMP2Q9NR77 195 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PCDHA6Q9UN73 950 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 COG5Q9UP83 839 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PCDHA8Q9Y5H6 950 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PCDHA11Q9Y5I1 949 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
RPAIN-204ENST00000405578 CCDC194A0A1B0GVG4 234 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 ZBBXA8MT70 800 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 ADCY6O43306 1168 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 STAM2O75886 525 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-204ENST00000405578 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
RPAIN-204ENST00000405578 MRE11P49959 708 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 JAKMIP3Q5VZ66 844 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
RPAIN-204ENST00000405578 ARMCX2Q7L311 632 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 KRT25Q7Z3Z0 450 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.49
RPAIN-204ENST00000405578 EPOPA6NHQ4 379 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 DTNBO60941 627 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 EIF3JO75822 258 aaKnown RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 CD4P01730 458 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 MMP1P03956 469 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 NR3C2P08235 984 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 POU3F3P20264 500 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 FOSBP53539 338 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 CCL23P55773 120 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 PDCD2LQ9BRP1 358 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 UPF3AQ9H1J1 476 aaKnown RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 SPC25Q9HBM1 224 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-204ENST00000405578 COL20A1Q9P218 1284 aa12.01□□□□□ -0.49
RPAIN-204ENST00000405578 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 CA3P07451 260 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 ATP2A2P16615 1042 aaKnown RBP12□□□□□ -0.49
RPAIN-204ENST00000405578 EDNRBP24530 442 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 ZNF76P36508 570 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
RPAIN-204ENST00000405578 ACVR2BQ13705 512 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 PGM5Q15124 567 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms