RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 KRT25Q7Z3Z0 450 aa16.6■□□□□ 0.25
CDPF1-203ENST00000404583 PLA2G4DQ86XP0 818 aa16.6■□□□□ 0.25
CDPF1-203ENST00000404583 C7orf61Q8IZ16 206 aa16.6■□□□□ 0.25
CDPF1-203ENST00000404583 GRIN2DO15399 1336 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 SCN10AQ9Y5Y9 1956 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 A0A0U1RQG5 324 aaPredicted RBP16.59■□□□□ 0.25
CDPF1-203ENST00000404583 CCDC194A0A1B0GVG4 234 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 KPNA6O60684 536 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 CIITAP33076 1130 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 USP11P51784 963 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 SP4Q02446 784 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 DGKDQ16760 1214 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 INF2Q27J81 1249 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
CDPF1-203ENST00000404583 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 NIPA1Q7RTP0 329 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 GIMAP8Q8ND71 665 aaPredicted RBP16.59■□□□□ 0.25
CDPF1-203ENST00000404583 C8orf76Q96K31 380 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 UIMC1Q96RL1 719 aa16.59■□□□□ 0.25
CDPF1-203ENST00000404583 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
CDPF1-203ENST00000404583 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
CDPF1-203ENST00000404583 BTBD18B2RXH4 712 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 CDK7P50613 346 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDPF1-203ENST00000404583 ITGA7Q13683 1181 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 PRR16Q569H4 304 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 DIS3L2Q8IYB7 885 aaKnown RBP16.58■□□□□ 0.24
CDPF1-203ENST00000404583 PPP1R13LQ8WUF5 828 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
CDPF1-203ENST00000404583 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 ARVCFO00192 962 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
CDPF1-203ENST00000404583 PPFIA4O75335 1185 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 CHMP4BP1P59074 171 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 TLE2Q04725 743 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 ITGB3BPQ13352 177 aaPredicted RBP16.57■□□□□ 0.24
CDPF1-203ENST00000404583 KAT2BQ92831 832 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 TNFRSF25Q93038 417 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 GPR20Q99678 358 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 PCDH10Q9P2E7 1040 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 NR2E3Q9Y5X4 410 aa16.57■□□□□ 0.24
CDPF1-203ENST00000404583 PQBP1O60828 265 aaKnown RBP16.56■□□□□ 0.24
CDPF1-203ENST00000404583 TDP2O95551 362 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
CDPF1-203ENST00000404583 GJB2P29033 226 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 LENG9Q96B70 501 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.56■□□□□ 0.24
CDPF1-203ENST00000404583 NFASCO94856 1347 aa16.56■□□□□ 0.24
CDPF1-203ENST00000404583 CYP3A7-CYP3A51PA0A087WV96 503 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 IPO5O00410 1097 aaKnown RBP16.55■□□□□ 0.24
CDPF1-203ENST00000404583 SYN1P17600 705 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 CYP3A7P24462 503 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-203ENST00000404583 CUL4AQ13619 759 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDPF1-203ENST00000404583 LETM2Q2VYF4 491 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 ANKRD33Q7Z3H0 272 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-203ENST00000404583 SLC9A2Q9UBY0 812 aa16.55■□□□□ 0.24
CDPF1-203ENST00000404583 ZMYND8Q9ULU4 1186 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-203ENST00000404583 GSTTP1A0A1W2PQM5 241 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
CDPF1-203ENST00000404583 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
CDPF1-203ENST00000404583 DHX15O43143 795 aaKnown RBP16.54■□□□□ 0.24
CDPF1-203ENST00000404583 LGALS2P05162 132 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
CDPF1-203ENST00000404583 NEK8Q86SG6 692 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 MROH7Q68CQ1 1323 aa16.54■□□□□ 0.24
CDPF1-203ENST00000404583 DCDC2CA8MYV0 355 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 MSH4O15457 936 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 F2P00734 622 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TCF7P36402 384 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 PSEN2P49810 448 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 FAAP100Q0VG06 881 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 MFSD10Q14728 455 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 Q4G0T1 1027 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 GJA10Q969M2 543 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 SNX21Q969T3 373 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 MBOAT7Q96N66 472 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 PRDM5Q9NQX1 630 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 KIF3AQ9Y496 699 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 H3BRB1 525 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 HAS3O00219 553 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 SLC37A4O43826 429 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms