RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SPC25Q9HBM1 224 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 KCNMB3Q9NPA1 279 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 SORBS3O60504 671 aa33.23■■■□□ 2.91
USP42-202ENST00000404008 FARP2O94887 1054 aaPredicted RBP33.23■■■□□ 2.91
USP42-202ENST00000404008 C6orf222P0C671 652 aaPredicted RBP33.23■■■□□ 2.91
USP42-202ENST00000404008 MCM7P33993 719 aa33.23■■■□□ 2.91
USP42-202ENST00000404008 IRX5P78411 483 aaPredicted RBP33.23■■■□□ 2.91
USP42-202ENST00000404008 SLC5A5Q92911 643 aa33.23■■■□□ 2.91
USP42-202ENST00000404008 SDF4Q9BRK5 362 aa33.23■■■□□ 2.91
USP42-202ENST00000404008 MLXIPQ9HAP2 919 aa33.23■■■□□ 2.91
USP42-202ENST00000404008 KIAA0100Q14667 2235 aaKnown RBP33.23■■■□□ 2.91
USP42-202ENST00000404008 MYADML2A6NDP7 307 aa33.22■■■□□ 2.91
USP42-202ENST00000404008 DHX15O43143 795 aaKnown RBP33.22■■■□□ 2.91
USP42-202ENST00000404008 NEMFO60524 1076 aa33.22■■■□□ 2.91
USP42-202ENST00000404008 TFRCP02786 760 aaKnown RBP33.22■■■□□ 2.91
USP42-202ENST00000404008 ZNF174Q15697 407 aa33.22■■■□□ 2.91
USP42-202ENST00000404008 KLHDC9Q8NEP7 349 aa33.22■■■□□ 2.91
USP42-202ENST00000404008 PCDHB6Q9Y5E3 794 aa33.22■■■□□ 2.91
USP42-202ENST00000404008 F13A1P00488 732 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 CAPN2P17655 700 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 CST5P28325 142 aaPredicted RBP33.21■■■□□ 2.91
USP42-202ENST00000404008 LRRC41Q15345 812 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 FSCN1Q16658 493 aaKnown RBP33.21■■■□□ 2.91
USP42-202ENST00000404008 FOXD4L5Q5VV16 416 aaPredicted RBP33.21■■■□□ 2.91
USP42-202ENST00000404008 RNF180Q86T96 592 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 ARRDC4Q8NCT1 418 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 FOXD4L4Q8WXT5 416 aaPredicted RBP33.21■■■□□ 2.91
USP42-202ENST00000404008 TBC1D22BQ9NU19 505 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 A6NJR5 290 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 TBX3O15119 743 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 BRD1O95696 1058 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 CPT1AP50416 773 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 HSDL1Q3SXM5 330 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 PPTC7Q8NI37 304 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 AFG1LQ8WV93 481 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 HAS1Q92839 578 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 GJA10Q969M2 543 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 SPATA33Q96N06 139 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 RIT2Q99578 217 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 JPH1Q9HDC5 661 aaPredicted RBP33.21■■■□□ 2.91
USP42-202ENST00000404008 ZDHHC9Q9Y397 364 aa33.21■■■□□ 2.91
USP42-202ENST00000404008 BEX3Q00994 111 aa33.2■■■□□ 2.9
USP42-202ENST00000404008 FAM20AQ96MK3 541 aa33.2■■■□□ 2.9
USP42-202ENST00000404008 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.2■■■□□ 2.9
USP42-202ENST00000404008 MYCNP04198 464 aaPredicted RBP33.19■■■□□ 2.9
USP42-202ENST00000404008 CALCRLQ16602 461 aa33.19■■■□□ 2.9
USP42-202ENST00000404008 GNASQ5JWF2 1037 aa33.19■■■□□ 2.9
USP42-202ENST00000404008 CCSAPQ6IQ19 270 aaPredicted RBP33.19■■■□□ 2.9
USP42-202ENST00000404008 FAM173BQ6P4H8 233 aa33.19■■■□□ 2.9
USP42-202ENST00000404008 SLC9A2Q9UBY0 812 aa33.19■■■□□ 2.9
USP42-202ENST00000404008 TELO2Q9Y4R8 837 aa33.19■■■□□ 2.9
USP42-202ENST00000404008 DNAH12Q6ZR08 3092 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 CCDC85CA6NKD9 419 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 PSMD10O75832 226 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 MMP3P08254 477 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 LRCH2Q5VUJ6 765 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 ANKLE1Q8NAG6 615 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 MTMR9Q96QG7 549 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 TMEM60Q9H2L4 133 aa33.18■■■□□ 2.9
USP42-202ENST00000404008 DDX39AO00148 427 aaKnown RBP33.17■■■□□ 2.9
USP42-202ENST00000404008 DNM1LO00429 736 aa33.17■■■□□ 2.9
USP42-202ENST00000404008 GAS7O60861 476 aa33.17■■■□□ 2.9
USP42-202ENST00000404008 SLFN12Q8IYM2 578 aa33.17■■■□□ 2.9
USP42-202ENST00000404008 GPR20Q99678 358 aa33.17■■■□□ 2.9
USP42-202ENST00000404008 NOP56O00567 594 aaKnown RBP33.16■■■□□ 2.9
USP42-202ENST00000404008 BAG4O95429 457 aaKnown RBP33.16■■■□□ 2.9
USP42-202ENST00000404008 MNX1P50219 401 aaPredicted RBP33.16■■■□□ 2.9
USP42-202ENST00000404008 SP4Q02446 784 aa33.16■■■□□ 2.9
USP42-202ENST00000404008 KCNA10Q16322 511 aa33.16■■■□□ 2.9
USP42-202ENST00000404008 BRDTQ58F21 947 aaPredicted RBP33.16■■■□□ 2.9
USP42-202ENST00000404008 C4orf32Q8N8J7 132 aa33.16■■■□□ 2.9
USP42-202ENST00000404008 TEKT3Q9BXF9 490 aa33.16■■■□□ 2.9
USP42-202ENST00000404008 MARCH6O60337 910 aa33.15■■■□□ 2.9
USP42-202ENST00000404008 CCNE2O96020 404 aa33.15■■■□□ 2.9
USP42-202ENST00000404008 HOXD8P13378 290 aaPredicted RBP33.15■■■□□ 2.9
USP42-202ENST00000404008 EN2P19622 333 aaPredicted RBP33.15■■■□□ 2.9
USP42-202ENST00000404008 PCSK9Q8NBP7 692 aaKnown RBP33.15■■■□□ 2.9
USP42-202ENST00000404008 IPO9Q96P70 1041 aaKnown RBP33.15■■■□□ 2.9
USP42-202ENST00000404008 TSEN34Q9BSV6 310 aaKnown RBP33.15■■■□□ 2.9
USP42-202ENST00000404008 KBTBD13C9JR72 458 aa33.14■■■□□ 2.9
USP42-202ENST00000404008 KRT76Q01546 638 aa33.14■■■□□ 2.9
USP42-202ENST00000404008 PTGDRQ13258 359 aa33.14■■■□□ 2.9
USP42-202ENST00000404008 WDR81Q562E7 1941 aa33.14■■■□□ 2.9
USP42-202ENST00000404008 ZEB2O60315 1214 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 OR52Z1P0C646 297 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 ACTR2P61160 394 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 NUCB2P80303 420 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 DGKDQ16760 1214 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 ZNF746Q6NUN9 644 aaPredicted RBP33.13■■■□□ 2.89
USP42-202ENST00000404008 B3GNT9Q6UX72 402 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 VAV3Q9UKW4 847 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 ELP1O95163 1332 aa33.13■■■□□ 2.89
USP42-202ENST00000404008 GSTTP1A0A1W2PQM5 241 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 PPFIA4O75335 1185 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 ASGR1P07306 291 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 SOX10P56693 466 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 UNC45AQ9H3U1 944 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 TCEAL9Q9UHQ7 104 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 PHF24Q9UPV7 400 aa33.12■■■□□ 2.89
USP42-202ENST00000404008 MOXD2PA6NHM9 499 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms