RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TROVE2P10155 538 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■□□□ 12.5
COL18A1-204ENST00000400337 ATP5OP48047 213 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 TFAMQ00059 246 aaKnown RBP19.77■□□□□ 0.76
COL18A1-204ENST00000400337 CUL4BQ13620 913 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 KRT31Q15323 416 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 PFKFB3Q16875 520 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-204ENST00000400337 PDZD4Q76G19 769 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-204ENST00000400337 CAPS2Q9BXY5 557 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 CYP27A1Q02318 531 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 PSMD6Q15008 389 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 RTKN2Q8IZC4 609 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 ARHGAP24Q8N264 748 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 FAM193BQ96PV7 902 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-204ENST00000400337 MED4Q9NPJ6 270 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 CPDO75976 1380 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 PHLPP2Q6ZVD8 1323 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 SEC31AO94979 1220 aaKnown RBP19.77■□□□□ 0.76
COL18A1-204ENST00000400337 KIF22Q14807 665 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 LLGL1Q15334 1064 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 KSR1Q8IVT5 923 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 LY9Q9HBG7 655 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 BBOF1Q8ND07 529 aa19.77■□□□□ 0.75
COL18A1-204ENST00000400337 OXER1Q8TDS5 423 aa19.77■□□□□ 0.75
COL18A1-204ENST00000400337 NUB1Q9Y5A7 615 aa19.77■□□□□ 0.75
COL18A1-204ENST00000400337 GBP1P32455 592 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 MXI1P50539 228 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 DALRD3Q5D0E6 543 aaKnown RBP19.76■□□□□ 0.75
COL18A1-204ENST00000400337 KCTD16Q68DU8 428 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 RPS6KC1Q96S38 1066 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 BUB1BO60566 1050 aaPredicted RBP19.76■□□□□ 0.75
COL18A1-204ENST00000400337 NDUFA10O95299 355 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 MAP7D3Q8IWC1 876 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 CASP1P29466 404 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 LRRC63Q05C16 580 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 CCDC170Q8IYT3 715 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 STK36Q9NRP7 1315 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 NBPF26B4DH59 902 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 HEXIM1O94992 359 aaKnown RBP19.76■□□□□ 0.75
COL18A1-204ENST00000400337 FOXO4P98177 505 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 NBPF10Q6P3W6 841 aaKnown RBP19.76■□□□□ 0.75
COL18A1-204ENST00000400337 NBPF15Q8N660 670 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 FAM71BQ8TC56 605 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 EPB41L5Q9HCM4 733 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 KLHL14Q9P2G3 628 aa19.76■□□□□ 0.75
COL18A1-204ENST00000400337 A6NJR5 290 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 SFI1A8K8P3 1242 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 TRIM11Q96F44 468 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 GOLGA8SH3BPF8 625 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 NOL3O60936 208 aaKnown RBP19.75■□□□□ 0.75
COL18A1-204ENST00000400337 ITKQ08881 620 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 BCAS4Q8TDM0 211 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 MAD1L1Q9Y6D9 718 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 FAM196BA6NMK8 535 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 ZBTB5O15062 677 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 CDC27P30260 824 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 Q3C1V9 767 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 POTEMA6NI47 508 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 RINT1Q6NUQ1 792 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 PDXDC2PQ6P474 469 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 ZBTB33Q86T24 672 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 RFX6Q8HWS3 928 aa19.75■□□□□ 0.75
COL18A1-204ENST00000400337 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
COL18A1-204ENST00000400337 NXF1Q9UBU9 619 aaKnown RBP19.75■□□□□ 0.75
COL18A1-204ENST00000400337 PSAPP07602 524 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 PANX2Q96RD6 677 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 TDRD3Q9H7E2 651 aaKnown RBP19.74■□□□□ 0.75
COL18A1-204ENST00000400337 PGRMC1O00264 195 aaKnown RBP19.74■□□□□ 0.75
COL18A1-204ENST00000400337 ASNSP08243 561 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 MB21D1Q8N884 522 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 GSDMBQ8TAX9 411 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 DCAF4Q8WV16 495 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 ZNF277Q9NRM2 450 aaPredicted RBP19.74■□□□□ 0.75
COL18A1-204ENST00000400337 DAAM1Q9Y4D1 1078 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 SERPING1P05155 500 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 OSTNP61366 133 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 C2orf54Q08AI8 447 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 XPOTO43592 962 aaKnown RBP19.74■□□□□ 0.75
COL18A1-204ENST00000400337 PIGOQ8TEQ8 1089 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 FAM149B1Q96BN6 582 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 WDR19Q8NEZ3 1342 aa19.74■□□□□ 0.75
COL18A1-204ENST00000400337 GOLGA8IPA6NC78 632 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 GOLGA8JA6NMD2 632 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 SGK1O00141 431 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 KIF11P52732 1056 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 AP3B2Q13367 1082 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 SNX1Q13596 522 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 CEP95Q96GE4 821 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 PCDHA6Q9UN73 950 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 PCDHA8Q9Y5H6 950 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 YWHAGP61981 247 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL18A1-204ENST00000400337 SCARF1Q14162 830 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 PCDHA13Q9Y5I0 950 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 GSG1L2A8MUP6 293 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L15C9J2P7 530 aa19.73■□□□□ 0.75
COL18A1-204ENST00000400337 USP17L13C9JLJ4 530 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms