RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 KRIT1O00522 736 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ZBTB43O43298 467 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 RPN2P04844 631 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 HSPA2P54652 639 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 DNALI1O14645 258 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 SFMBT2Q5VUG0 894 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 PMF1Q6P1K2 205 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 SHQ1Q6PI26 577 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 TRPM8Q7Z2W7 1104 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 DHX57Q6P158 1386 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM24O15164 1050 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 NCF4Q15080 339 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 HAVCR1Q96D42 359 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 RMND5BQ96G75 393 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 TRAF3IP3Q9Y228 551 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 KRT37O76014 449 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 TUBA3CQ13748 450 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 OLFML2BQ68BL8 750 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 IFNA14P01570 189 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 IFNB1P01574 187 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 MYL1P05976 194 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 LONRF2Q1L5Z9 754 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 TAF1BQ53T94 588 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 USHBP1Q8N6Y0 703 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 CLK1P49759 484 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 C16orf71Q8IYS4 520 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 ARL3P36405 182 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 CCDC153Q494R4 210 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 SF3B1O75533 1304 aaKnown RBP eCLIP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 ZSCAN22P10073 491 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 USP39Q53GS9 565 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 EHD2Q9NZN4 543 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 ICA1Q05084 483 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 INPP5AQ14642 412 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 PYHIN1Q6K0P9 492 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 VCPP55072 806 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 AASDHQ4L235 1098 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 FRMD6Q96NE9 622 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 CFAP99D6REC4 459 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 OLR1P78380 273 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 PRRG3Q9BZD7 231 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 PSMD12O00232 456 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 SAT1P21673 171 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 MYL5Q02045 173 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 MCUQ8NE86 351 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 PBXIP1Q96AQ6 731 aa9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-220ENST00000399655 GYG2O15488 501 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 ADALQ6DHV7 355 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 MMTAG2Q9BU76 263 aaKnown RBP9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 DSEQ9UL01 958 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 GNAT2P19087 354 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 MSANTD1Q6ZTZ1 278 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 CHERPQ8IWX8 916 aaKnown RBP9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 INTS4Q96HW7 963 aaKnown RBP9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 MYRIPQ8NFW9 859 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 SENP1Q9P0U3 644 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 YWHABP31946 246 aaKnown RBP9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 BBS2Q9BXC9 721 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 PCDHGB4Q9UN71 923 aa9.21□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF197O14709 1029 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 CSE1LP55060 971 aaKnown RBP9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 CDC37L1Q7L3B6 337 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 DDHD1Q8NEL9 900 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 RUBCNLQ9H714 662 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 STX8Q9UNK0 236 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 GRSF1Q12849 480 aaKnown RBP eCLIP9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 C1orf146Q5VVC0 180 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 PALB2Q86YC2 1186 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 MYO7AQ13402 2215 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 PLIN5Q00G26 463 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 C6orf10Q5SRN2 563 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 ATP6V1HQ9UI12 483 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 ATP8B3O60423 1300 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 TBC1D8BQ0IIM8 1120 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 CLEC16AQ2KHT3 1053 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 PPP2R3BQ9Y5P8 575 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 TRMT1LQ7Z2T5 733 aaKnown RBP9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 MGAT4AQ9UM21 535 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 IDI1Q13907 227 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 ICE2Q659A1 982 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 UTS2BQ765I0 119 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms