RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 MTMR3Q13615 1198 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 INF2Q27J81 1249 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 PARP6Q2NL67 630 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 HIC2Q96JB3 615 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 TTYH3Q9C0H2 523 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 COBLO75128 1261 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 KRT40Q6A162 431 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 TEKT1Q969V4 418 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 PUS3Q9BZE2 481 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 NACA2Q9H009 215 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 NSRP1Q9H0G5 558 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 ETNK2Q9NVF9 386 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 FBXL5Q9UKA1 691 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 A0A0J9YVX5 310 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 CETN3O15182 167 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 NVLO15381 856 aaKnown RBP12.06□□□□□ -0.48
ITSN1-207ENST00000399338 SUPT3HO75486 399 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 BCRP11274 1271 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 HOXD12P35452 270 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 CCNFP41002 786 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 CUL1Q13616 776 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 MUM1Q2TAK8 710 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 KRT71Q3SY84 523 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 RETREG2Q8NC44 543 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 WDR66Q8TBY9 1149 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 SH3TC2Q8TF17 1288 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
ITSN1-207ENST00000399338 GRID2IPA4D2P6 1211 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 FOXO3O43524 673 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 ITGA2BP08514 1039 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 RCN2Q14257 317 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 USH1GQ495M9 461 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 ZC2HC1CQ53FD0 456 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 DHTKD1Q96HY7 919 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 NUDCD1Q96RS6 583 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 LRRC37A3O60309 1634 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 ATP9AO75110 1047 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 GJB6O95452 261 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 RASA1P20936 1047 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 CD97P48960 835 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 KLHDC7AQ5VTJ3 777 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 NME9Q86XW9 330 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 WDR60Q8WVS4 1066 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 AGPAT5Q9NUQ2 364 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 ZNHIT6Q9NWK9 470 aaKnown RBP12.05□□□□□ -0.48
ITSN1-207ENST00000399338 RWDD2AQ9UIY3 292 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 TBC1D30Q9Y2I9 924 aa12.05□□□□□ -0.48
ITSN1-207ENST00000399338 O00370 1275 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 GSTM4Q03013 218 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 HLTFQ14527 1009 aaKnown RBP eCLIP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 TAF7Q15545 349 aaPredicted RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 CFAP61Q8NHU2 1237 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 RSPH1Q8WYR4 309 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 PRMT1Q99873 361 aaKnown RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 FAM114A2Q9NRY5 505 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 MRC1P22897 1456 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 ECM29Q5VYK3 1845 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 TMEM247A6NEH6 219 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 GOLGA8BA8MQT2 603 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 LGALS16A8MUM7 142 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 HNRNPCP07910 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 FLT3P36888 993 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 PDE6CP51160 858 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms