RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 RAG1P15918 1043 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 PSEN2P49810 448 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 ARHGAP4P98171 946 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 MTMR1Q13613 665 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 ANKRD1Q15327 319 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 GDF6Q6KF10 455 aaPredicted RBP16.53■□□□□ 0.24
COL13A1-204ENST00000398975 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 TRIM22Q8IYM9 498 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
COL13A1-204ENST00000398975 GTF3C6Q969F1 213 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
COL13A1-204ENST00000398975 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 SH3GLB2Q9NR46 395 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
COL13A1-204ENST00000398975 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 A0A1W2PPC1 479 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 M0R2N6 131 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 MEIS1O00470 390 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 TLR3O15455 904 aaKnown RBP16.52■□□□□ 0.24
COL13A1-204ENST00000398975 LGALS2P05162 132 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.24
COL13A1-204ENST00000398975 SP4Q02446 784 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
COL13A1-204ENST00000398975 NEDD9Q14511 834 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 MFSD10Q14728 455 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 CEP55Q53EZ4 464 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 C16orf59Q7L2K0 433 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
COL13A1-204ENST00000398975 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 SEZ6LQ9BYH1 1024 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 WNT8AQ9H1J5 351 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 KCNH7Q9NS40 1196 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 HDAC6Q9UBN7 1215 aa16.52■□□□□ 0.24
COL13A1-204ENST00000398975 STK36Q9NRP7 1315 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 CYP3A4P08684 503 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 NLRP5P59047 1200 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 SHHQ15465 462 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
COL13A1-204ENST00000398975 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
COL13A1-204ENST00000398975 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 HIPK3Q9H422 1215 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 AGO4Q9HCK5 861 aaKnown RBP16.51■□□□□ 0.23
COL13A1-204ENST00000398975 KCNJ14Q9UNX9 436 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 SCN5AQ14524 2016 aa16.51■□□□□ 0.23
COL13A1-204ENST00000398975 JAK2O60674 1132 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 CSF2RAP15509 400 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 GNA11P29992 359 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
COL13A1-204ENST00000398975 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
COL13A1-204ENST00000398975 CPLX2Q6PUV4 134 aaKnown RBP16.5■□□□□ 0.23
COL13A1-204ENST00000398975 WNT8BQ93098 351 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 LENG9Q96B70 501 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
COL13A1-204ENST00000398975 CCL23P55773 120 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 FPGSQ05932 587 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 PCYT2Q99447 389 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 TANC1Q9C0D5 1861 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
COL13A1-204ENST00000398975 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
COL13A1-204ENST00000398975 H3BRB1 525 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 NOP56O00567 594 aaKnown RBP16.48■□□□□ 0.23
COL13A1-204ENST00000398975 MAFGO15525 162 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 DHX15O43143 795 aaKnown RBP16.48■□□□□ 0.23
COL13A1-204ENST00000398975 CDKL5O76039 1030 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 CCNE2O96020 404 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 ACRP10323 421 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 HOXC8P31273 242 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 TCF7P36402 384 aaPredicted RBP16.48■□□□□ 0.23
COL13A1-204ENST00000398975 PTGISQ16647 500 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
COL13A1-204ENST00000398975 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 PLA2G4DQ86XP0 818 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 OXER1Q8TDS5 423 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 SCLYQ96I15 445 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
COL13A1-204ENST00000398975 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
COL13A1-204ENST00000398975 NFASCO94856 1347 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 CIITAP33076 1130 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 ZNF76P36508 570 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms