RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 KIAA1217Q5T5P2 1943 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MYO18AQ92614 2054 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 ASB14A6NK59 587 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 BTBD18B2RXH4 712 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SPTLC2O15270 562 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 KPNA6O60684 536 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CYBBP04839 570 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RPN2P04844 631 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ATP2B1P20020 1258 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 STAT1P42224 750 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MMS22LQ6ZRQ5 1243 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 NLRP9Q7RTR0 991 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 METTL13Q8N6R0 699 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MAGEB6Q8N7X4 407 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MLKLQ8NB16 471 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 DEPTORQ8TB45 409 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PPP1R13BQ96KQ4 1090 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 DSCC1Q9BVC3 393 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CARD9Q9H257 536 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TBC1D22BQ9NU19 505 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ADAMTS8Q9UP79 889 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SPACA6W5XKT8 324 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ARAP2Q8WZ64 1704 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 HNRNPDLO14979 420 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 TBC1D8BQ0IIM8 1120 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 KRT81Q14533 505 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PCGF5Q86SE9 256 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZSCAN30Q86W11 494 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ARHGAP18Q8N392 663 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PDCD7Q8N8D1 485 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 SPATA5Q8NB90 893 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 BANK1Q8NDB2 785 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GIPC2Q8TF65 315 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 UCMAQ8WVF2 138 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 NLRP7Q8WX94 980 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 YY1AP1Q9H869 796 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TRIM33Q9UPN9 1127 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TRPM3Q9HCF6 1732 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 C19orf81C9J6K1 198 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RNASEH1O60930 286 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 PAK1Q13153 545 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GRM1Q13255 1194 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 KRT33BQ14525 404 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TMCO5AQ8N6Q1 288 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZBTB38Q8NAP3 1195 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 NKX2-3Q8TAU0 364 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 NEK9Q8TD19 979 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MCUR1Q96AQ8 359 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SPON1Q9HCB6 807 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GJA3Q9Y6H8 435 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 NKRFO15226 690 aaKnown RBP eCLIP2.95□□□□□ -1.94
CHD9-202ENST00000398510 ORC4O43929 436 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GCNT3O95395 438 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TROVE2P10155 538 aaKnown RBP eCLIP2.95□□□□□ -1.94
CHD9-202ENST00000398510 ITGA6P23229 1130 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PAK2Q13177 524 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PSMD2Q13200 908 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ABCB5Q2M3G0 1257 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ALG1Q9BT22 464 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZBED2Q9BTP6 218 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MXD3Q9BW11 206 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MTMR12Q9C0I1 747 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PSTPIP2Q9H939 334 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ENOPH1Q9UHY7 261 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 DNPEPQ9ULA0 475 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PALD1Q9ULE6 856 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PCDHA1Q9Y5I3 950 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TNKSO95271 1327 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP17L3A6NCW0 530 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP17L4A6NCW7 530 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CALB1P05937 261 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 UQCRBP14927 111 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SMARCA1P28370 1054 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 INHBEP58166 350 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SNAPC2Q13487 334 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 STILQ15468 1287 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MAPRE1Q15691 268 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 CCDC122Q5T0U0 273 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PRPF40BQ6NWY9 871 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP17L1Q7RTZ2 530 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CCDC186Q7Z3E2 898 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MIER3Q7Z3K6 550 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 FNBP4Q8N3X1 1017 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 KIFC3Q9BVG8 833 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 STOML1Q9UBI4 398 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SMAPO00193 183 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 IKBKBO14920 756 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MCF2LO15068 1137 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 LACTBP83111 547 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 RAPGEF1Q13905 1077 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GCKRQ14397 625 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 VEPH1Q14D04 833 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RFX8Q6ZV50 586 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RUFY3Q7L099 469 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MFN1Q8IWA4 741 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 AVL9Q8NBF6 648 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PCSK9Q8NBP7 692 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 NR2E3Q9Y5X4 410 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ATAD5Q96QE3 1844 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EFCAB8A8MWE9 144 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms