RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 STK17AQ9UEE5 414 aa21.9■■□□□ 1.1
PDLIM2-205ENST00000397761 KDM3AQ9Y4C1 1321 aa21.89■■□□□ 1.1
PDLIM2-205ENST00000397761 GAS7O60861 476 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 EIF3JO75822 258 aaKnown RBP21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 SARSP49591 514 aaKnown RBP21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 SEMA3FQ13275 785 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 ITGB3BPQ13352 177 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 TAF1CQ15572 869 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 STXBP2Q15833 593 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 HAUS3Q68CZ6 603 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 NLRX1Q86UT6 975 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 ERMNQ8TAM6 284 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 MORC4Q8TE76 937 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 TEKT3Q9BXF9 490 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 TBC1D22BQ9NU19 505 aa21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 MYH9P35579 1960 aaKnown RBP21.89■■□□□ 1.09
PDLIM2-205ENST00000397761 RASSF10A6NK89 507 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 B4DLN1 442 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 RPA1P27694 616 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 ICAM3P32942 547 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 SASS6Q6UVJ0 657 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 KCTD17Q8N5Z5 321 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 RASSF8Q8NHQ8 419 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 ERCC4Q92889 916 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 CDHR1Q96JP9 859 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 POLR3CQ9BUI4 534 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 NT5C3AQ9H0P0 336 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 BLOC1S4Q9NUP1 217 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 PCDHA5Q9Y5H7 936 aa21.88■■□□□ 1.09
PDLIM2-205ENST00000397761 EML1O00423 815 aa21.87■■□□□ 1.09
PDLIM2-205ENST00000397761 MYL1P05976 194 aa21.87■■□□□ 1.09
PDLIM2-205ENST00000397761 PGK2P07205 417 aa21.87■■□□□ 1.09
PDLIM2-205ENST00000397761 PRR29P0C7W0 189 aa21.87■■□□□ 1.09
PDLIM2-205ENST00000397761 GRAMD1CQ8IYS0 662 aa21.87■■□□□ 1.09
PDLIM2-205ENST00000397761 GOLGA6L3A6NEY3 463 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 SPATA31C2B4DYI2 1134 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 GTPBP6O43824 516 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 TLR2O60603 784 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 SPATA31C1P0DKV0 1188 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 MAPK4P31152 587 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 CCT6AP40227 531 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 DPYDQ12882 1025 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 ECM1Q16610 540 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 GNPTABQ3T906 1256 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 NCAPH2Q6IBW4 605 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 C17orf99Q6UX52 265 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 ZIC5Q96T25 663 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 HSD17B14Q9BPX1 270 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 UNC45AQ9H3U1 944 aa21.86■■□□□ 1.09
PDLIM2-205ENST00000397761 ATP9AO75110 1047 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 MED24O75448 989 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 MUTP22033 750 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 NOGQ13253 232 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 STX1AQ16623 288 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 ZNF792Q3KQV3 632 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 WDR78Q5VTH9 848 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 CATSPER3Q86XQ3 398 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 CDK5RAP3Q96JB5 506 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 MPHOSPH6Q99547 160 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 NFASCO94856 1347 aa21.85■■□□□ 1.09
PDLIM2-205ENST00000397761 CAVIN2O95810 425 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 KCNA2P16389 499 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 AFMP43652 599 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 GRB14Q14449 540 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 EPHA7Q15375 998 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 ZRSR1Q15695 479 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 CYP4F22Q6NT55 531 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 KCNK18Q7Z418 384 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 GPR142Q7Z601 462 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 RAD54LQ92698 747 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 PLIN2Q99541 437 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 EIF2AK1Q9BQI3 630 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 RBSNQ9H1K0 784 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 TUFT1Q9NNX1 390 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 CPA4Q9UI42 421 aa21.84■■□□□ 1.09
PDLIM2-205ENST00000397761 SMC2O95347 1197 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 ADORA2AP29274 412 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 PDE4DQ08499 809 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 ZNF467Q7Z7K2 595 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 REM2Q8IYK8 340 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 TRIML1Q8N9V2 468 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 NEK9Q8TD19 979 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 LARP4BQ92615 738 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 GSDMAQ96QA5 445 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 SENP7Q9BQF6 1050 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 ZFYVE28Q9HCC9 887 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 ANO10Q9NW15 660 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 IVNS1ABPQ9Y6Y0 642 aa21.83■■□□□ 1.09
PDLIM2-205ENST00000397761 POTEB3A0JP26 581 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 NLRP12P59046 1061 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 KRT76Q01546 638 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 DEFB115Q30KQ5 88 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 CNNM4Q6P4Q7 775 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 POTEBQ6S5H4 581 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 PLEKHH3Q7Z736 793 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 SMARCE1Q969G3 411 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 KIAA1024Q9UPX6 916 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 DIS3Q9Y2L1 958 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 THSD7BQ9C0I4 1608 aa21.83■■□□□ 1.08
PDLIM2-205ENST00000397761 ARID2Q68CP9 1835 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms