RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 AFF2P51816 1311 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 STXBP3O00186 592 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 RAD51CO43502 376 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 FAM107AO95990 144 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 SMTNP53814 917 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 MECOMQ03112 1051 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 NONOQ15233 471 aaKnown RBP eCLIP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ASTE1Q2TB18 679 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 CCDC121Q6ZUS5 278 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 TAF4BQ92750 862 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 TSG101Q99816 390 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 BARHL2Q9NY43 387 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ARPP21Q9UBL0 812 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 WNK3Q9BYP7 1800 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 A0A1B0GUA9 196 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 MYMKA6NI61 221 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 GCOM1H8Y6P7 765 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 MYZAPP0CAP1 466 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 KLRC1P26715 233 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 TXKP42681 527 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 SNX1Q13596 522 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 LRRC41Q15345 812 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 NSUN4Q96CB9 384 aaKnown RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ATP8A2Q9NTI2 1148 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 KAT6BQ8WYB5 2073 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 BAZ2AQ9UIF9 1905 aaKnown RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 GRID2IPA4D2P6 1211 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 DNM1LO00429 736 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 CYTH3O43739 400 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 GOLGA8HP0CJ92 632 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ITGB3BPQ13352 177 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 UBE4AQ14139 1066 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 GRM4Q14833 912 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 CRYMQ14894 314 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ODF2Q5BJF6 829 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 WLSQ5T9L3 541 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 HGSNATQ68CP4 663 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 KRT25Q7Z3Z0 450 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 ZNF483Q8TF39 744 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-206ENST00000397163 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 PAGR1Q9BTK6 254 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 CPVLQ9H3G5 476 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 MKNK2Q9HBH9 465 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 BAIAP2L1Q9UHR4 511 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 STX8Q9UNK0 236 aa10.07□□□□□ -0.8
CAPN3-206ENST00000397163 COL1A1P02452 1464 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 SERPING1P05155 500 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 POLR2FP61218 127 aaKnown RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 NAB2Q15742 525 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 PARP10Q53GL7 1025 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 GUF1Q8N442 669 aaKnown RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 CEP120Q8N960 986 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 CYFIP2Q96F07 1278 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 MMTAG2Q9BU76 263 aaKnown RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 LSM14BQ9BX40 385 aaKnown RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 EDEM3Q9BZQ6 932 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 SLIT2O94813 1529 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 ARAP2Q8WZ64 1704 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 KCNK3O14649 394 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 RTN2O75298 545 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 CLSTN1O94985 981 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 RAPGEF1Q13905 1077 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 SLC35G1Q2M3R5 365 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 COBLL1Q53SF7 1204 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 EMC10Q5UCC4 262 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 PPP4R3AQ6IN85 833 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 NEK8Q86SG6 692 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 OR2W6PQ8NHA6 318 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 DYNLL2Q96FJ2 89 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 FAM84BQ96KN1 310 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 INPP4AQ96PE3 977 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 TAF1DQ9H5J8 278 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-206ENST00000397163 TMBIM4Q9HC24 238 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 JAG2Q9Y219 1238 aa10.06□□□□□ -0.8
CAPN3-206ENST00000397163 ABCB11O95342 1321 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 SMCO2A6NFE2 343 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 HSPA9P38646 679 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 QPCTQ16769 361 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 MEI1Q5TIA1 1274 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 STAMBPL1Q96FJ0 436 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 CEP72Q9P209 647 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms