RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 GNAQP50148 359 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 FCHSD1Q86WN1 690 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 MB21D2Q8IYB1 491 aaPredicted RBP18.81■□□□□ 0.6
CLTA-203ENST00000396603 TMTC2Q8N394 836 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
CLTA-203ENST00000396603 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
CLTA-203ENST00000396603 ATP6V0A1Q93050 837 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 HLA-CQ95604 372 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
CLTA-203ENST00000396603 COL4A6Q14031 1691 aa18.81■□□□□ 0.6
CLTA-203ENST00000396603 TRIP12Q14669 1992 aaPredicted RBP18.81■□□□□ 0.6
CLTA-203ENST00000396603 PTPRSQ13332 1948 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 LCHNA4D1U4 455 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 AMHP03971 560 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 MRPS9P82933 396 aaKnown RBP18.8■□□□□ 0.6
CLTA-203ENST00000396603 HTRA4P83105 476 aaPredicted RBP18.8■□□□□ 0.6
CLTA-203ENST00000396603 PLEKHG4Q58EX7 1191 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 PCNX4Q63HM2 1172 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 TEX2Q8IWB9 1127 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 CUL5Q93034 780 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 WNT8BQ93098 351 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
CLTA-203ENST00000396603 SAMD11Q96NU1 681 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 C1QTNF1Q9BXJ1 281 aa18.8■□□□□ 0.6
CLTA-203ENST00000396603 LINC01553A4QN01 128 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 SMIM10L2AP0DMW4 78 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 SMIM10L2BP0DMW5 78 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 THPOP40225 353 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 ANTXR2P58335 489 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 ZNF200P98182 395 aaPredicted RBP18.79■□□□□ 0.6
CLTA-203ENST00000396603 TFF2Q03403 129 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 HIC1Q14526 733 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 SP7Q8TDD2 431 aaPredicted RBP18.79■□□□□ 0.6
CLTA-203ENST00000396603 APBB2Q92870 758 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 CDHR1Q96JP9 859 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 GPR20Q99678 358 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 SEC63Q9UGP8 760 aaKnown RBP18.79■□□□□ 0.6
CLTA-203ENST00000396603 BDP1A6H8Y1 2624 aa18.79■□□□□ 0.6
CLTA-203ENST00000396603 CALM1P0DP23 149 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 CALM2P0DP24 149 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 CALM3P0DP25 149 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 TCTN1Q2MV58 587 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 NLRX1Q86UT6 975 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 ZNF654Q8IZM8 581 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 DBF4BQ8NFT6 615 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 SEPT8Q92599 483 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 GPKOWQ92917 476 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CLTA-203ENST00000396603 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 RNPEPQ9H4A4 650 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 SUGCTQ9HAC7 445 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 LY9Q9HBG7 655 aa18.78■□□□□ 0.6
CLTA-203ENST00000396603 COL4A4P53420 1690 aaPredicted RBP18.78■□□□□ 0.6
CLTA-203ENST00000396603 PRRC2BQ5JSZ5 2229 aaKnown RBP18.78■□□□□ 0.6
CLTA-203ENST00000396603 MYH7BA7E2Y1 1941 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 RPLP2P05387 115 aaKnown RBP18.77■□□□□ 0.6
CLTA-203ENST00000396603 LIFRP42702 1097 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 ADAM17P78536 824 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 CYFIP1Q7L576 1253 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 GPRASP2Q96D09 838 aa18.77■□□□□ 0.6
CLTA-203ENST00000396603 NCOR1O75376 2440 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 NRCAMQ92823 1304 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 MEIS2O14770 477 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 MAFGO15525 162 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 TREHO43280 583 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 COL9A1P20849 921 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 MCM5P33992 734 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 KCNQ1P51787 676 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 BMP2KLQ5H9B9 411 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 FAM26DQ5JW98 314 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 TOP1MTQ969P6 601 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
CLTA-203ENST00000396603 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
CLTA-203ENST00000396603 KRT40Q6A162 431 aa18.75■□□□□ 0.59
CLTA-203ENST00000396603 TAF2Q6P1X5 1199 aa18.75■□□□□ 0.59
CLTA-203ENST00000396603 TMCO2Q7Z6W1 182 aaPredicted RBP18.75■□□□□ 0.59
CLTA-203ENST00000396603 GDPD5Q8WTR4 605 aa18.75■□□□□ 0.59
CLTA-203ENST00000396603 SIP14410 1827 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 CCDC69A6NI79 296 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 PRC1O43663 620 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 SORBS3O60504 671 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 PTPROQ16827 1216 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.74■□□□□ 0.596e-22■■■□□ 17.6
CLTA-203ENST00000396603 SPRED2Q7Z698 418 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 MYOCDQ8IZQ8 938 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 RTEL1Q9NZ71 1219 aa18.74■□□□□ 0.59
CLTA-203ENST00000396603 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.73■□□□□ 0.59
CLTA-203ENST00000396603 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
CLTA-203ENST00000396603 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
CLTA-203ENST00000396603 FAM43BQ6ZT52 329 aaPredicted RBP18.73■□□□□ 0.59
CLTA-203ENST00000396603 FBXO22Q8NEZ5 403 aa18.73■□□□□ 0.59
CLTA-203ENST00000396603 BCAS3Q9H6U6 928 aa18.73■□□□□ 0.59
CLTA-203ENST00000396603 PSTPIP2Q9H939 334 aa18.73■□□□□ 0.59
CLTA-203ENST00000396603 SETD4Q9NVD3 440 aa18.73■□□□□ 0.59
CLTA-203ENST00000396603 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms