RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 V9GY48 417 aaPredicted RBP21.04■□□□□ 0.96
FXN-203ENST00000396366 MYO9BQ13459 2157 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 H3BRB1 525 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 NOP56O00567 594 aaKnown RBP21.03■□□□□ 0.96
FXN-203ENST00000396366 ACTN1P12814 892 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 ITGB5P18084 799 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 PTK7Q13308 1070 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 KRT32Q14532 448 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 TCTN1Q2MV58 587 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 XRRA1Q6P2D8 792 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 LRRC8DQ7L1W4 858 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.03■□□□□ 0.96
FXN-203ENST00000396366 CCDC155Q8N6L0 562 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 TUT1Q9H6E5 874 aaKnown RBP21.03■□□□□ 0.96
FXN-203ENST00000396366 RBM28Q9NW13 759 aaKnown RBP21.03■□□□□ 0.96
FXN-203ENST00000396366 NAP1L2Q9ULW6 460 aaPredicted RBP21.03■□□□□ 0.96
FXN-203ENST00000396366 PCDHA6Q9UN73 950 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 PCDHA8Q9Y5H6 950 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
FXN-203ENST00000396366 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 NBNO60934 754 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 HSPA4P34932 840 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 APOBRQ0VD83 1088 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 ZNF618Q5T7W0 954 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 UTP14CQ5TAP6 766 aaKnown RBP21.02■□□□□ 0.96
FXN-203ENST00000396366 TRAF7Q6Q0C0 670 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 Q6ZUG5 572 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 NLRX1Q86UT6 975 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 TRIM50Q86XT4 487 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
FXN-203ENST00000396366 SLC28A3Q9HAS3 691 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 PKD2L1Q9P0L9 805 aa21.02■□□□□ 0.96
FXN-203ENST00000396366 SMIM10L2AP0DMW4 78 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 SMIM10L2BP0DMW5 78 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 ADD1P35611 737 aaKnown RBP21.01■□□□□ 0.95
FXN-203ENST00000396366 RBL2Q08999 1139 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 TMCO2Q7Z6W1 182 aaPredicted RBP21.01■□□□□ 0.95
FXN-203ENST00000396366 PGBD1Q96JS3 809 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 RNPEPQ9H4A4 650 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 PCDHA11Q9Y5I1 949 aa21.01■□□□□ 0.95
FXN-203ENST00000396366 SPDYE3A6NKU9 549 aa21■□□□□ 0.95
FXN-203ENST00000396366 HMGB1P09429 215 aaKnown RBP21■□□□□ 0.95
FXN-203ENST00000396366 KCNA2P16389 499 aa21■□□□□ 0.95
FXN-203ENST00000396366 NAPAP54920 295 aa21■□□□□ 0.95
FXN-203ENST00000396366 FGD1P98174 961 aa21■□□□□ 0.95
FXN-203ENST00000396366 ADGRE1Q14246 886 aa21■□□□□ 0.95
FXN-203ENST00000396366 MBTPS1Q14703 1052 aa21■□□□□ 0.95
FXN-203ENST00000396366 USP38Q8NB14 1042 aa21■□□□□ 0.95
FXN-203ENST00000396366 SENP7Q9BQF6 1050 aa21■□□□□ 0.95
FXN-203ENST00000396366 USP26Q9BXU7 913 aa21■□□□□ 0.95
FXN-203ENST00000396366 UBIAD1Q9Y5Z9 338 aa21■□□□□ 0.95
FXN-203ENST00000396366 PTPRSQ13332 1948 aa21■□□□□ 0.95
FXN-203ENST00000396366 C17orf102A2RUQ5 167 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 STXBP3O00186 592 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 TREHO43280 583 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 SERINC5Q86VE9 423 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 CYP2W1Q8TAV3 490 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 BRF1Q92994 677 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 ATP6V0A1Q93050 837 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 GPRASP2Q96D09 838 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 SETD4Q9NVD3 440 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 TMEM260Q9NX78 707 aa20.99■□□□□ 0.95
FXN-203ENST00000396366 GSTTP1A0A1W2PQM5 241 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 CXCL10P02778 98 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 CA3P07451 260 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 HOXC8P31273 242 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 THPOP40225 353 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 PPP2R2DQ66LE6 453 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 HERC6Q8IVU3 1022 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 PPM1EQ8WY54 764 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 OSBPL7Q9BZF2 842 aa20.98■□□□□ 0.95
FXN-203ENST00000396366 SMCO2A6NFE2 343 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 ADAMTS3O15072 1205 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 ARHGEF15O94989 841 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 TCF7P36402 384 aaPredicted RBP20.97■□□□□ 0.95
FXN-203ENST00000396366 MTMR1Q13613 665 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 BLOC1S2Q6QNY1 142 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 PHOSPHO2Q8TCD6 241 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 SLC9A7Q96T83 725 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 GAS2L1Q99501 681 aaPredicted RBP20.97■□□□□ 0.95
FXN-203ENST00000396366 CERS4Q9HA82 394 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 JADE2Q9NQC1 790 aa20.97■□□□□ 0.95
FXN-203ENST00000396366 RFXAPO00287 272 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 PPFIA3O75145 1194 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 BAIAP3O94812 1187 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 RPS6KB1P23443 525 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 METAP2P50579 478 aaKnown RBP eCLIP20.96■□□□□ 0.95
FXN-203ENST00000396366 ADCY7P51828 1080 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 WDR5P61964 334 aaKnown RBP20.96■□□□□ 0.95
FXN-203ENST00000396366 DEFB103AP81534 67 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 CNKSR3Q6P9H4 555 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 GIMAP8Q8ND71 665 aaPredicted RBP20.96■□□□□ 0.95
FXN-203ENST00000396366 PRDM6Q9NQX0 595 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 BARHL2Q9NY43 387 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 CUL9Q8IWT3 2517 aa20.96■□□□□ 0.95
FXN-203ENST00000396366 TRANK1O15050 2925 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 RSPH10B2B2RC85 870 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 RSPH10BP0C881 870 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms