RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 CEP85LQ5SZL2 805 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 ACTRT1Q8TDG2 376 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 TMEM47Q9BQJ4 181 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 ESYT3A0FGR9 886 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 ZSCAN5CA6NGD5 496 aaPredicted RBP9.56□□□□□ -0.88
BDNF-204ENST00000395980 KLRF2D3W0D1 207 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 MYO1FO00160 1098 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 RGL2O15211 777 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 RASSF9O75901 435 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 HIBADHP31937 336 aaKnown RBP9.56□□□□□ -0.88
BDNF-204ENST00000395980 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 GUCY2FP51841 1108 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 MAATS1Q7Z4T9 603 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
BDNF-204ENST00000395980 TBCKQ8TEA7 893 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 SCFD2Q8WU76 684 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 MKNK2Q9HBH9 465 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 ZNF287Q9HBT7 754 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 SLC12A6Q9UHW9 1150 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 KIF13BQ9NQT8 1826 aa9.56□□□□□ -0.88
BDNF-204ENST00000395980 GOLGA6L7A0A1B0GV03 622 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 C5orf60A6NFR6 353 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 H0YGN5 161 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 FTCDO95954 541 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 USP11P51784 963 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 CALCRLQ16602 461 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CCDC40Q4G0X9 1142 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CYFIP2Q96F07 1278 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 LSM14BQ9BX40 385 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 TANGO6Q9C0B7 1094 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 ANKRD2Q9GZV1 360 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 NFS1Q9Y697 457 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CCDC188H7C350 402 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 SLC26A4O43511 780 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 PRDX5P30044 214 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 RPS6KA1Q15418 735 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 TRIM59Q8IWR1 403 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 SEC63Q9UGP8 760 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 COL14A1Q05707 1796 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 ECHS1P30084 290 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 SPDYCQ5MJ68 293 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 KRT79Q5XKE5 535 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CCDC121Q6ZUS5 278 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CCDC13Q8IYE1 715 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 ZNF444Q8N0Y2 327 aaPredicted RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 TBC1D5Q92609 795 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 CXorf56Q9H5V9 222 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 NLRC4Q9NPP4 1024 aa9.55□□□□□ -0.88
BDNF-204ENST00000395980 BZW2Q9Y6E2 419 aaKnown RBP9.55□□□□□ -0.88
BDNF-204ENST00000395980 GMNCA6NCL1 334 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 E7EVH7 732 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 TRAPPC3O43617 180 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 KIF4AO95239 1232 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 HSD17B3P37058 310 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 ASIC2Q16515 512 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 KIAA0753Q2KHM9 967 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 SLC10A5Q5PT55 438 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 MAGEC3Q8TD91 643 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 DDX12PQ92771 950 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 KLC4Q9NSK0 619 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 TMCO5BA8MYB1 307 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 C21orf2O43822 256 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 TXKP42681 527 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 POLR2FP61218 127 aaKnown RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 KLHL30Q0D2K2 578 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 DZIP1Q86YF9 867 aaKnown RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 A0A087X0T9 212 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 CCDC172P0C7W6 258 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 FAM228BP0C875 321 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 RDXP35241 583 aaKnown RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 SEC24CP53992 1094 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 PPP4CP60510 307 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 ATP2B2Q01814 1243 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 COASYQ13057 564 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 PREPLQ4J6C6 727 aaPredicted RBP9.54□□□□□ -0.88
BDNF-204ENST00000395980 FAM26FQ5R3K3 315 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 GANQ9H2C0 597 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 SLITRK6Q9H5Y7 841 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 KAT6BQ8WYB5 2073 aa9.54□□□□□ -0.88
BDNF-204ENST00000395980 LOC102724159A0A0B4J2E5 919 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 WTIPA6NIX2 430 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 TRAF5O00463 557 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 RASA1P20936 1047 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 ZNF844Q08AG5 666 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 IFT88Q13099 833 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 HLTFQ14527 1009 aaKnown RBP eCLIP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms