RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GJB4Q9NTQ9 266 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 VAV3Q9UKW4 847 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 PCDHA5Q9Y5H7 936 aa5.97□□□□□ -1.45
VPS41-203ENST00000395969 A0A1B0GVL5 298 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 GOLGA6L9A6NEM1 432 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 SMCO2A6NFE2 343 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 H7C1D1 291 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 MAPK13O15264 365 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 PPFIA4O75335 1185 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 ICAM1P05362 532 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.45
VPS41-203ENST00000395969 DPCR1Q3MIW9 517 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 RRP12Q5JTH9 1297 aaKnown RBP5.96□□□□□ -1.45
VPS41-203ENST00000395969 DTHD1Q6ZMT9 781 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 EPM2AIP1Q7L775 607 aaPredicted RBP5.96□□□□□ -1.45
VPS41-203ENST00000395969 FAM71BQ8TC56 605 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 MORC4Q8TE76 937 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 WDR24Q96S15 920 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 RAB34Q9BZG1 259 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 FBXL5Q9UKA1 691 aa5.96□□□□□ -1.45
VPS41-203ENST00000395969 F5H6K3 240 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 WNT10BO00744 389 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ADAMTS3O15072 1205 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 MAFGO15525 162 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 PRDM1O75626 825 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 NDUFB10O96000 172 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 MNX1P50219 401 aaPredicted RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 PRELPP51888 382 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ZNF131P52739 623 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 USP14P54578 494 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 KLRC3Q07444 240 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 PPP2R5AQ15172 486 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 CENPPQ6IPU0 288 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 SND1Q7KZF4 910 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS41-203ENST00000395969 CCDC24Q8N4L8 307 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 CHURC1Q8WUH1 139 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 RIT2Q99578 217 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 CREBZFQ9NS37 354 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 FAN1Q9Y2M0 1017 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 PPP2R2CQ9Y2T4 447 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 POTEB2H3BUK9 544 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 TPD52L2O43399 206 aaKnown RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 N4BP1O75113 896 aaKnown RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 EIF3JO75822 258 aaKnown RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 BMP3P12645 472 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 VEGFAP15692 232 aaPredicted RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 ANXA13P27216 316 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ABCD1P33897 745 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 COPB2P35606 906 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 JAG1P78504 1218 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 AMPD3Q01432 767 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ICA1Q05084 483 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 DLGAP5Q15398 846 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ZRSR1Q15695 479 aaKnown RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 DOK7Q18PE1 504 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 SLFN13Q68D06 897 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 UNC13DQ70J99 1090 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 CNNM3Q8NE01 707 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ZNF507Q8TCN5 953 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 NUP133Q8WUM0 1156 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 UPF1Q92900 1129 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS41-203ENST00000395969 PNMA5Q96PV4 448 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 PIGSQ96S52 555 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 DBNDD1Q9H9R9 158 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 BLOC1S4Q9NUP1 217 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 TMOD2Q9NZR1 351 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 ADD3Q9UEY8 706 aaKnown RBP5.96□□□□□ -1.46
VPS41-203ENST00000395969 SUFUQ9UMX1 484 aa5.96□□□□□ -1.46
VPS41-203ENST00000395969 NFASCO94856 1347 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 CCDC194A0A1B0GVG4 234 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 LCA5LO95447 670 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 RXRAP19793 462 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TUBB4BP68371 445 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 FANCCQ00597 558 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 GRIN1Q05586 938 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 GRB10Q13322 594 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 QRICH1Q2TAL8 776 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 APBB1IPQ7Z5R6 666 aaPredicted RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 C12orf56Q8IXR9 622 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 GUF1Q8N442 669 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 CEP120Q8N960 986 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 KAT2BQ92831 832 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TACO1Q9BSH4 297 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 FAM107BQ9H098 131 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 SLC38A10Q9HBR0 1119 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 SERTAD1Q9UHV2 236 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 RALGAPA2Q2PPJ7 1873 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 A0A1W2PRG0 241 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 CCDC189A1A4V9 331 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 RPA1P27694 616 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 MAP2K2P36507 400 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 LRRC63Q05C16 580 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TTI2Q6NXR4 508 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 USP17L2Q6R6M4 530 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 PIK3AP1Q6ZUJ8 805 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 SRGAP1Q7Z6B7 1085 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 ANKRD20A12PQ8NF67 263 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms