RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 KIF22Q14807 665 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 USP49Q70CQ1 688 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 DHX58Q96C10 678 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 ZIC5Q96T25 663 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 STK17AQ9UEE5 414 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 VAV3Q9UKW4 847 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 NFASCO94856 1347 aa15.37■□□□□ 0.05
VAPB-202ENST00000395802 SPATA31C2B4DYI2 1134 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 TNPO2O14787 897 aaKnown RBP15.36■□□□□ 0.05
VAPB-202ENST00000395802 JAK3P52333 1124 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 FCGRTP55899 365 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 SPIRE1Q08AE8 756 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 CAMK4Q16566 473 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 LONRF3Q496Y0 759 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 NCAPH2Q6IBW4 605 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 PANK2Q9BZ23 570 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 RPA1P27694 616 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 CDC25AP30304 524 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
VAPB-202ENST00000395802 RGS2P41220 211 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 NEDD9Q14511 834 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
VAPB-202ENST00000395802 HYIQ5T013 277 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 MAMDC4Q6UXC1 1216 aa15.36■□□□□ 0.05
VAPB-202ENST00000395802 SMAP1Q8IYB5 467 aaPredicted RBP15.36■□□□□ 0.05
VAPB-202ENST00000395802 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
VAPB-202ENST00000395802 ASTN1O14525 1302 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 PLXNB2O15031 1838 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 HOXC6P09630 235 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 VEGFBP49765 207 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 IRF5Q13568 498 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 EPHA7Q15375 998 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 MORN1Q5T089 497 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 ZNF746Q6NUN9 644 aaPredicted RBP15.35■□□□□ 0.05
VAPB-202ENST00000395802 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
VAPB-202ENST00000395802 GJA10Q969M2 543 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
VAPB-202ENST00000395802 R3HDMLQ9H3Y0 253 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 TUFT1Q9NNX1 390 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 VTA1Q9NP79 307 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 SAMM50Q9Y512 469 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 SYNGAP1Q96PV0 1343 aa15.35■□□□□ 0.05
VAPB-202ENST00000395802 PP2D1A8MPX8 630 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 WDR64B1ANS9 1081 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
VAPB-202ENST00000395802 COBLO75128 1261 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 RGS20O76081 388 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 SMC2O95347 1197 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 E2F4Q16254 413 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 SEPT14Q6ZU15 432 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 ARMCX2Q7L311 632 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 GRPEL1Q9HAV7 217 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 JPH1Q9HDC5 661 aaPredicted RBP15.34■□□□□ 0.05
VAPB-202ENST00000395802 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 ZNF236Q9UL36 1845 aa15.34■□□□□ 0.05
VAPB-202ENST00000395802 ZNFX1Q9P2E3 1918 aaKnown RBP15.34■□□□□ 0.05
VAPB-202ENST00000395802 DHX15O43143 795 aaKnown RBP15.33■□□□□ 0.05
VAPB-202ENST00000395802 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.05
VAPB-202ENST00000395802 PLCG1P19174 1290 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 MRE11P49959 708 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 ITGB3BPQ13352 177 aaPredicted RBP15.33■□□□□ 0.05
VAPB-202ENST00000395802 TTLL4Q14679 1199 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 ARHGEF6Q15052 776 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 POSTNQ15063 836 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.05
VAPB-202ENST00000395802 B3GNT9Q6UX72 402 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 SCFD2Q8WU76 684 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 MAML3Q96JK9 1138 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 FGD4Q96M96 766 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 MMTAG2Q9BU76 263 aaKnown RBP15.33■□□□□ 0.05
VAPB-202ENST00000395802 KIAA1468Q9P260 1216 aa15.33■□□□□ 0.05
VAPB-202ENST00000395802 LCTP09848 1927 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 CHMP2AO43633 222 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 KCNA2P16389 499 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
VAPB-202ENST00000395802 SP3Q02447 781 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 SEMA3FQ13275 785 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 EIF2AK1Q9BQI3 630 aaKnown RBP15.33■□□□□ 0.04
VAPB-202ENST00000395802 TINF2Q9BSI4 451 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 UNC45AQ9H3U1 944 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 ABHD16BQ9H3Z7 469 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 BMP2KQ9NSY1 1161 aaPredicted RBP15.33■□□□□ 0.04
VAPB-202ENST00000395802 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 PKD2L1Q9P0L9 805 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 SLC9A2Q9UBY0 812 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 DNM3Q9UQ16 869 aa15.33■□□□□ 0.04
VAPB-202ENST00000395802 A0A087X0B3 334 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 ATP9AO75110 1047 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 CAVIN2O95810 425 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 P4HBP07237 508 aaKnown RBP15.32■□□□□ 0.04
VAPB-202ENST00000395802 HOXD10P28358 340 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms