RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TRIM50Q86XT4 487 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 FANCBQ8NB91 859 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 PPM1EQ8WY54 764 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CUL5Q93034 780 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 GPR20Q99678 358 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CNTNAP5Q8WYK1 1306 aa20.77■□□□□ 0.91
CXCL12-204ENST00000395793 MICAL3Q7RTP6 2002 aa20.77■□□□□ 0.91
CXCL12-204ENST00000395793 VCANP13611 3396 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 BAIAP3O94812 1187 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 WDR5P61964 334 aaKnown RBP20.76■□□□□ 0.91
CXCL12-204ENST00000395793 EXOSC10Q01780 885 aaKnown RBP20.76■□□□□ 0.91
CXCL12-204ENST00000395793 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 SPRED2Q7Z698 418 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 HERC6Q8IVU3 1022 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 PHOSPHO2Q8TCD6 241 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 BRPF3Q9ULD4 1205 aa20.76■□□□□ 0.91
CXCL12-204ENST00000395793 EPOPA6NHQ4 379 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 H3BRB1 525 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 CDC45O75419 566 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 SMIM10L2AP0DMW4 78 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 SMIM10L2BP0DMW5 78 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 DEFB103AP81534 67 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 NEDD9Q14511 834 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 SERINC5Q86VE9 423 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 TUT1Q9H6E5 874 aaKnown RBP20.75■□□□□ 0.91
CXCL12-204ENST00000395793 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
CXCL12-204ENST00000395793 SIP14410 1827 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 RFXAPO00287 272 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
CXCL12-204ENST00000395793 ATP9AO75110 1047 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 IGFBP4P22692 258 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 SP4Q02446 784 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 FUT2Q10981 343 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 RNF20Q5VTR2 975 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 TYW1BQ6NUM6 668 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 XRRA1Q6P2D8 792 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 OSBPL7Q9BZF2 842 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 RNPEPQ9H4A4 650 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 CERS4Q9HA82 394 aa20.74■□□□□ 0.91
CXCL12-204ENST00000395793 PRRC2BQ5JSZ5 2229 aaKnown RBP20.73■□□□□ 0.91
CXCL12-204ENST00000395793 C17orf102A2RUQ5 167 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 TREHO43280 583 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 KCNA2P16389 499 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 ITGB5P18084 799 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 TAP1Q03518 808 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 CCDC85BQ15834 202 aaPredicted RBP20.73■□□□□ 0.91
CXCL12-204ENST00000395793 TSGA10IPQ3SY00 556 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 WWC2Q6AWC2 1192 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 HEATR3Q7Z4Q2 680 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 SENP7Q9BQF6 1050 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 KAT6AQ92794 2004 aa20.73■□□□□ 0.91
CXCL12-204ENST00000395793 SPTBN5Q9NRC6 3674 aaKnown RBP20.73■□□□□ 0.91
CXCL12-204ENST00000395793 TRANK1O15050 2925 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 LCHNA4D1U4 455 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 PARNO95453 639 aaKnown RBP20.72■□□□□ 0.91
CXCL12-204ENST00000395793 KCNJ6P48051 423 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 UTP14CQ5TAP6 766 aaKnown RBP20.72■□□□□ 0.91
CXCL12-204ENST00000395793 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
CXCL12-204ENST00000395793 ATP6V0A1Q93050 837 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 GPRASP2Q96D09 838 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 FAM217BQ9NTX9 383 aaPredicted RBP20.72■□□□□ 0.91
CXCL12-204ENST00000395793 UBIAD1Q9Y5Z9 338 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 TTC28Q96AY4 2481 aa20.72■□□□□ 0.91
CXCL12-204ENST00000395793 REV3LO60673 3130 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 THPOP40225 353 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 MKRN4PQ13434 485 aaPredicted RBP20.71■□□□□ 0.91
CXCL12-204ENST00000395793 NLRX1Q86UT6 975 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 SETD4Q9NVD3 440 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 PCDHA6Q9UN73 950 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 PCDHA8Q9Y5H6 950 aa20.71■□□□□ 0.91
CXCL12-204ENST00000395793 CPA1P15085 419 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 CDC27P30260 824 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 ADAM17P78536 824 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 RTN1Q16799 776 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 PGBD1Q96JS3 809 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
CXCL12-204ENST00000395793 PKD2L1Q9P0L9 805 aa20.7■□□□□ 0.9
CXCL12-204ENST00000395793 ABHD14A-ACY1A0A1B0GW23 586 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 GSTTP1A0A1W2PQM5 241 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 RSPH10B2B2RC85 870 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 ZBTB43O43298 467 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 TLL1O43897 1013 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 LGR5O75473 907 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 RSPH10BP0C881 870 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 TCF7P36402 384 aaPredicted RBP20.69■□□□□ 0.9
CXCL12-204ENST00000395793 KRT40Q6A162 431 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 SYNE3Q6ZMZ3 975 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 DBF4BQ8NFT6 615 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 LMBR1Q8WVP7 490 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 KCNB2Q92953 911 aa20.69■□□□□ 0.9
CXCL12-204ENST00000395793 KLF18A0A0U1RQI7 1052 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 SPDYE3A6NKU9 549 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 GOLGA8AA7E2F4 631 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 GOLGA8BA8MQT2 603 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 CTSHP09668 335 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.68■□□□□ 0.9
CXCL12-204ENST00000395793 MICALL1Q8N3F8 863 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms