RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 SIAH1Q8IUQ4 282 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 CRYGNQ8WXF5 182 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 CALML4Q96GE6 196 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 NOC4LQ9BVI4 516 aaKnown RBP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 F8W031 263 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-204ENST00000394601 LCA5LO95447 670 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 KCNQ5Q9NR82 932 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 ARHGAP20Q9P2F6 1191 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 PLAGL2Q9UPG8 496 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 PCDHAC2Q9Y5I4 1007 aa17.18■□□□□ 0.34
PTBP1-204ENST00000394601 ABCB11O95342 1321 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 EIF4E1BA6NMX2 242 aaKnown RBP17.17■□□□□ 0.34
PTBP1-204ENST00000394601 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 SLC16A2P36021 539 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 VWA3BQ502W6 1294 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 CCDC170Q8IYT3 715 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 DDX12PQ92771 950 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 ZNF185O15231 689 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 MSL3Q8N5Y2 521 aaKnown RBP17.17■□□□□ 0.34
PTBP1-204ENST00000394601 BAP1Q92560 729 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 USP40Q9NVE5 1235 aa17.17■□□□□ 0.34
PTBP1-204ENST00000394601 TRIM21P19474 475 aaKnown RBP17.16■□□□□ 0.34
PTBP1-204ENST00000394601 PEX19P40855 299 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 ZBTB5O15062 677 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 SCNN1DP51172 638 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 ASTE1Q2TB18 679 aaPredicted RBP17.16■□□□□ 0.34
PTBP1-204ENST00000394601 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 NDST4Q9H3R1 872 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 MACROD2A1Z1Q3 448 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
PTBP1-204ENST00000394601 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 SYF2O95926 243 aaKnown RBP17.15■□□□□ 0.34
PTBP1-204ENST00000394601 MYBL2P10244 700 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 KCNMA1Q12791 1236 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 CCDC122Q5T0U0 273 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 KCNV1Q6PIU1 500 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 SH3BP5LQ7L8J4 393 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 CAPS2Q9BXY5 557 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 KCNMB3Q9NPA1 279 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 PDE2AO00408 941 aaPredicted RBP17.15■□□□□ 0.34
PTBP1-204ENST00000394601 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
PTBP1-204ENST00000394601 IRAK1P51617 712 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 SNX29Q8TEQ0 813 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
PTBP1-204ENST00000394601 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
PTBP1-204ENST00000394601 ERCC3P19447 782 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 NF2P35240 595 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 TUBB4BP68371 445 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 DOK7Q18PE1 504 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 MKL1Q969V6 931 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 USP8P40818 1118 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 TNNI2P48788 182 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 RNASE9P60153 205 aaKnown RBP17.14■□□□□ 0.33
PTBP1-204ENST00000394601 LRRC63Q05C16 580 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 LRRC41Q15345 812 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-204ENST00000394601 MYH10P35580 1976 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 NOL4O94818 638 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 CXCR5P32302 372 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 KRT83P78385 493 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 JAKMIP2Q96AA8 810 aa17.14■□□□□ 0.33
PTBP1-204ENST00000394601 CYP3A7-CYP3A51PA0A087WV96 503 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 PAX7P23759 505 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 CYP3A7P24462 503 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 COASYQ13057 564 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
PTBP1-204ENST00000394601 HGSNATQ68CP4 663 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 ZC3H3Q8IXZ2 948 aaKnown RBP17.13■□□□□ 0.33
PTBP1-204ENST00000394601 CUL5Q93034 780 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 RBBP6Q7Z6E9 1792 aaKnown RBP17.13■□□□□ 0.33
PTBP1-204ENST00000394601 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 MEIS2O14770 477 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 HPDP32754 393 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-204ENST00000394601 VAV2P52735 878 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 PSMD2Q13200 908 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 NAA25Q14CX7 972 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 FAM198AQ9UFP1 575 aa17.13■□□□□ 0.33
PTBP1-204ENST00000394601 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L15C9J2P7 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L13C9JLJ4 530 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms