RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LGALS2P05162 132 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 RSPH10BP0C881 870 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 GNAT1P11488 350 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 KIF5BP33176 963 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 ANTXR2P58335 489 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 TFF2Q03403 129 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 SKIV2LQ15477 1246 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 TCTN1Q2MV58 587 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 ATP6V0A1Q93050 837 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 TGS1Q96RS0 853 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 INSL6Q9Y581 213 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 TAF6LQ9Y6J9 622 aa20.2■□□□□ 0.82
SNRPA1-202ENST00000394082 NOP56O00567 594 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-202ENST00000394082 PLEKHG4Q58EX7 1191 aa20.19■□□□□ 0.82
SNRPA1-202ENST00000394082 PCNX4Q63HM2 1172 aa20.19■□□□□ 0.82
SNRPA1-202ENST00000394082 CTCFLQ8NI51 663 aaPredicted RBP20.19■□□□□ 0.82
SNRPA1-202ENST00000394082 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.824e-9■■■□□ 16.8
SNRPA1-202ENST00000394082 HLA-CQ95604 372 aa20.19■□□□□ 0.82
SNRPA1-202ENST00000394082 LINC01553A4QN01 128 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 SMIM10L2AP0DMW4 78 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 SMIM10L2BP0DMW5 78 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 THPOP40225 353 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 GNAQP50148 359 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 HTRA4P83105 476 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 GIMAP8Q8ND71 665 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 DBF4BQ8NFT6 615 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 GPR20Q99678 358 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 RNPEPQ9H4A4 650 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 SUGCTQ9HAC7 445 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-202ENST00000394082 COL4A4P53420 1690 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 MEIS2O14770 477 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 AMHP03971 560 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 ADAM17P78536 824 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 KRT40Q6A162 431 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 TMCO2Q7Z6W1 182 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 ZNF654Q8IZM8 581 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 SP7Q8TDD2 431 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 CUL5Q93034 780 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 TMEM87BQ96K49 555 aa20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 ZNF215Q9UL58 517 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-202ENST00000394082 TREHO43280 583 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 KCNQ1P51787 676 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 CYFIP1Q7L576 1253 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 SPRED2Q7Z698 418 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 RPAINQ86UA6 219 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 SMARCC2Q8TAQ2 1214 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 CDHR1Q96JP9 859 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 SAMD11Q96NU1 681 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 BCAS3Q9H6U6 928 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 RBM8AQ9Y5S9 174 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 COL4A6Q14031 1691 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 SIP14410 1827 aa20.16■□□□□ 0.82
SNRPA1-202ENST00000394082 MICAL3Q7RTP6 2002 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 SORBS3O60504 671 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 CALM1P0DP23 149 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 CALM2P0DP24 149 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 CALM3P0DP25 149 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 MCM5P33992 734 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 LIFRP42702 1097 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 FAM26DQ5JW98 314 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.15■□□□□ 0.827e-6■□□□□ 8.4
SNRPA1-202ENST00000394082 NLRX1Q86UT6 975 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 SEPT8Q92599 483 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 APBB2Q92870 758 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 ZFP91Q96JP5 570 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 C1QTNF1Q9BXJ1 281 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 NRCAMQ92823 1304 aa20.15■□□□□ 0.82
SNRPA1-202ENST00000394082 TCF20Q9UGU0 1960 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 COL9A1P20849 921 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 GDPD5Q8WTR4 605 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 TOP1MTQ969P6 601 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 GPRASP2Q96D09 838 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 RTEL1Q9NZ71 1219 aa20.14■□□□□ 0.81
SNRPA1-202ENST00000394082 NECAB3Q96P71 396 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-202ENST00000394082 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 MAFGO15525 162 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 PRC1O43663 620 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 TAF2Q6P1X5 1199 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 SRBD1Q8N5C6 995 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 SETD4Q9NVD3 440 aa20.12■□□□□ 0.81
SNRPA1-202ENST00000394082 CCDC69A6NI79 296 aa20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 RPLP2P05387 115 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 FBXO22Q8NEZ5 403 aa20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 LMBR1Q8WVP7 490 aa20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 MYL10Q9BUA6 226 aa20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 LSG1Q9H089 658 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-202ENST00000394082 KCNA2P16389 499 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms