RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 FANCBQ8NB91 859 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 GPR20Q99678 358 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 SEC63Q9UGP8 760 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 SLC12A7Q9Y666 1083 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 EPOPA6NHQ4 379 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 H3BRB1 525 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 FIBPO43427 364 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 BAIAP3O94812 1187 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 CALM1P0DP23 149 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 CALM2P0DP24 149 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 CALM3P0DP25 149 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 IGFBP4P22692 258 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 WDR5P61964 334 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 EXOSC10Q01780 885 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 SPRED2Q7Z698 418 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 SERINC5Q86VE9 423 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 TCEANC2Q96MN5 208 aa21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 TUT1Q9H6E5 874 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-205ENST00000393551 RFXAPO00287 272 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 SMIM10L2AP0DMW4 78 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 SMIM10L2BP0DMW5 78 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 DEFB103AP81534 67 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 TAP1Q03518 808 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 NEDD9Q14511 834 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 CCDC85BQ15834 202 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 MICU3Q86XE3 530 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 TRIM50Q86XT4 487 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 CUL5Q93034 780 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 RNPEPQ9H4A4 650 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 PSTPIP2Q9H939 334 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 CERS4Q9HA82 394 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 BRPF3Q9ULD4 1205 aa21.01■□□□□ 0.95
PDLIM7-205ENST00000393551 ATP9AO75110 1047 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 UBE2SQ16763 222 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 CNKSR3Q6P9H4 555 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 APOA5Q6Q788 366 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 NEK1Q96PY6 1258 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 SENP7Q9BQF6 1050 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 USP26Q9BXU7 913 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 OSBPL7Q9BZF2 842 aa21■□□□□ 0.95
PDLIM7-205ENST00000393551 MICAL3Q7RTP6 2002 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 LCHNA4D1U4 455 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 NOP56O00567 594 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 TREHO43280 583 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 PARNO95453 639 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 ITGB5P18084 799 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 FUT2Q10981 343 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 TSGA10IPQ3SY00 556 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 TYW1BQ6NUM6 668 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 XRRA1Q6P2D8 792 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 CNTNAP5Q8WYK1 1306 aa20.99■□□□□ 0.95
PDLIM7-205ENST00000393551 C17orf102A2RUQ5 167 aa20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 KCNA2P16389 499 aa20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 MKRN4PQ13434 485 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 RNF20Q5VTR2 975 aa20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 ATP6V0A1Q93050 837 aa20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 KAT6AQ92794 2004 aa20.98■□□□□ 0.95
PDLIM7-205ENST00000393551 THPOP40225 353 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 ADAM17P78536 824 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 SP4Q02446 784 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 WWC2Q6AWC2 1192 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 DHX32Q7L7V1 743 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 HEATR3Q7Z4Q2 680 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 GPRASP2Q96D09 838 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 FAM217BQ9NTX9 383 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 SETD4Q9NVD3 440 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 UBIAD1Q9Y5Z9 338 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 NCOR1O75376 2440 aa20.97■□□□□ 0.95
PDLIM7-205ENST00000393551 ABHD14A-ACY1A0A1B0GW23 586 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 TLL1O43897 1013 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 CDC45O75419 566 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 LGR5O75473 907 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 POU3F3P20264 500 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 KCNJ6P48051 423 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 UTP14CQ5TAP6 766 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 KRT40Q6A162 431 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 NLRX1Q86UT6 975 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 PCDHA6Q9UN73 950 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 PCDHA8Q9Y5H6 950 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 MTCH2Q9Y6C9 303 aa20.96■□□□□ 0.95
PDLIM7-205ENST00000393551 GSTTP1A0A1W2PQM5 241 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 RSPH10B2B2RC85 870 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 GJB5O95377 273 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 RSPH10BP0C881 870 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 TJAP1Q5JTD0 557 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 DBF4BQ8NFT6 615 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 ARNTL2Q8WYA1 636 aa20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 COL4A4P53420 1690 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-205ENST00000393551 SIP14410 1827 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 BDP1A6H8Y1 2624 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 LPXNO60711 386 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 CPA1P15085 419 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 CDC27P30260 824 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 TCF7P36402 384 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 IKBKEQ14164 716 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 PLEKHG4Q58EX7 1191 aa20.94■□□□□ 0.94
PDLIM7-205ENST00000393551 LMBR1Q8WVP7 490 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms