RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ATP1A1P05023 1023 aaKnown RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 CCT5P48643 541 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 KLRC3Q07444 240 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 COASYQ13057 564 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 SH3RF1Q7Z6J0 888 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 CEP104O60308 925 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 MYCLP12524 364 aaPredicted RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 EHHADHQ08426 723 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 AMIGO3Q86WK7 504 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 RIC8AQ9NPQ8 531 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 FRMD4BQ9Y2L6 1034 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 PCDHA13Q9Y5I0 950 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 EXOC3O60645 756 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 EZRP15311 586 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 NT5C2P49902 561 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 IFI16Q16666 785 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 AOC3Q16853 763 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 CAPN11Q9UMQ6 739 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 FTCDO95954 541 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 ARHGAP4P98171 946 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 LRRC63Q05C16 580 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 MASTLQ96GX5 879 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 DHX36Q9H2U1 1008 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 GOLGA6L7A0A1B0GV03 622 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 ABCB4P21439 1286 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 SLC7A5Q01650 507 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 GFPT1Q06210 699 aaPredicted RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 CTTNQ14247 550 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 SYDE2Q5VT97 1194 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 NSMFQ6X4W1 530 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 CCDC170Q8IYT3 715 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 SUGCTQ9HAC7 445 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 KBTBD4Q9NVX7 518 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 A0A1B0GUA9 196 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 CHRNA5P30532 468 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 GCKP35557 465 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 CRAMP1Q96RY5 1269 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 SELENOOQ9BVL4 669 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 HYOU1Q9Y4L1 999 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
CALD1-203ENST00000393118 ITIH6Q6UXX5 1313 aa11.57□□□□□ -0.56
CALD1-203ENST00000393118 PVALEFA0A1B0GWK0 134 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 A0A1W2PQC6 194 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 ZNF185O15231 689 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 C21orf2O43822 256 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 PLEKP08567 350 aaPredicted RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 SRGNP10124 158 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 IFFO1Q0D2I5 559 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 EXOC3L4Q17RC7 722 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 TNFRSF25Q93038 417 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 BICD1Q96G01 975 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 MTRQ99707 1265 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 C7orf25Q9BPX7 421 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 TRIM31Q9BZY9 425 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 ECE2O60344 883 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 ABCC6O95255 1503 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 GNA14O95837 355 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 VSNL1P62760 191 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 FAM178BQ8IXR5 827 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 EFCAB13Q8IY85 973 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 U2AF1L4Q8WU68 220 aaKnown RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 MED15Q96RN5 788 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 GCOM1H8Y6P7 765 aaPredicted RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 NDUFAB1O14561 156 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 KCNK3O14649 394 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 POLR2MP0CAP2 368 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 TM4SF1P30408 202 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 CASP8Q14790 479 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 NPY5RQ15761 445 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 TTI2Q6NXR4 508 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 MICALCLQ6ZW33 695 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 NOA1Q8NC60 698 aaKnown RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 CCDC113Q9H0I3 377 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 FAM204AQ9H8W3 233 aa11.56□□□□□ -0.56
CALD1-203ENST00000393118 DDX4Q9NQI0 724 aaKnown RBP11.56□□□□□ -0.56
CALD1-203ENST00000393118 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
CALD1-203ENST00000393118 NCK2O43639 380 aa11.55□□□□□ -0.56
CALD1-203ENST00000393118 ALAS1P13196 640 aa11.55□□□□□ -0.56
CALD1-203ENST00000393118 TAL1P17542 331 aaPredicted RBP11.55□□□□□ -0.56
CALD1-203ENST00000393118 TADA2BQ86TJ2 420 aa11.55□□□□□ -0.56
CALD1-203ENST00000393118 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
CALD1-203ENST00000393118 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.55□□□□□ -0.56
CALD1-203ENST00000393118 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms