RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ARVCFO00192 962 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 ATP9AO75110 1047 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 ARP10275 920 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 PRR16Q569H4 304 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 MOXD1Q6UVY6 613 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 DIS3L2Q8IYB7 885 aaKnown RBP17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 KATNAL1Q9BW62 490 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 PKD2L1Q9P0L9 805 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 NFASCO94856 1347 aa17.09■□□□□ 0.33
IGHV3-53-201ENST00000390627 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 INF2Q27J81 1249 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 PIK3AP1Q6ZUJ8 805 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 NEK8Q86SG6 692 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 JPH1Q9HDC5 661 aaPredicted RBP17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.32
IGHV3-53-201ENST00000390627 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 F2P00734 622 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 PSMC6P62333 389 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 GUCY1B3Q02153 619 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 SP4Q02446 784 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 NR5A1Q13285 461 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 ANKRD33Q7Z3H0 272 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 SLC43A3Q8NBI5 491 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 TOX2Q96NM4 488 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 GPR20Q99678 358 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 ZNF577Q9BSK1 485 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 TCEAL9Q9UHQ7 104 aa17.07■□□□□ 0.32
IGHV3-53-201ENST00000390627 SCN10AQ9Y5Y9 1956 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 CYP3A7-CYP3A51PA0A087WV96 503 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 TLR3O15455 904 aaKnown RBP17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 CYP3A7P24462 503 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 GJB2P29033 226 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 CDK7P50613 346 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 TLE2Q04725 743 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 CUL4AQ13619 759 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 Q4G0T1 1027 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 SNX21Q969T3 373 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 TBC1D22BQ9NU19 505 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 SLC9A2Q9UBY0 812 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 PRKAG2Q9UGJ0 569 aa17.06■□□□□ 0.32
IGHV3-53-201ENST00000390627 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 GRIN2DO15399 1336 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 EDIL3O43854 480 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 TDP2O95551 362 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 LGALS2P05162 132 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 PTPN11Q06124 597 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 ITGB3BPQ13352 177 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 NFRKBQ6P4R8 1299 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 SEPT1Q8WYJ6 367 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 LENG9Q96B70 501 aa17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-53-201ENST00000390627 CLTBP09497 229 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 TCF7P36402 384 aaPredicted RBP17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 PSEN2P49810 448 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 MFSD10Q14728 455 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 EARS2Q5JPH6 523 aaKnown RBP17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 PRPF38BQ5VTL8 546 aaKnown RBP17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 PPP4R3AQ6IN85 833 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 KAT2BQ92831 832 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
IGHV3-53-201ENST00000390627 H0YGN5 161 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 H3BQV1 296 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 H3BRB1 525 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 DDX39AO00148 427 aaKnown RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 HAS3O00219 553 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 MSH4O15457 936 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 ACTR2P61160 394 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 KRT76Q01546 638 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 KIAA0753Q2KHM9 967 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 INTS4Q96HW7 963 aaKnown RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 RIT2Q99578 217 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms