RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RBM12Q9NTZ6 932 aaKnown RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 SERPING1P05155 500 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 BMP6P22004 513 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 EZH2Q15910 746 aaKnown RBP15.54■□□□□ 0.08
RTF1-201ENST00000389629 NTRK3Q16288 839 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 NBPF9Q3BBW0 867 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 EXOC3L4Q17RC7 722 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 NEK9Q8TD19 979 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 PSMD1Q99460 953 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 WDR17Q8IZU2 1322 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 RASSF2P50749 326 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 PARP2Q9UGN5 583 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 DMGDHQ9UI17 866 aaKnown RBP15.54■□□□□ 0.08
RTF1-201ENST00000389629 THAP12O43422 761 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 CIB2O75838 187 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 NR2F2P24468 414 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 USP17L2Q6R6M4 530 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 DDX25Q9UHL0 483 aaKnown RBP15.54■□□□□ 0.08
RTF1-201ENST00000389629 RAB21Q9UL25 225 aa15.54■□□□□ 0.08
RTF1-201ENST00000389629 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 MAEAQ7L5Y9 396 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 RIC8AQ9NPQ8 531 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
RTF1-201ENST00000389629 PDHA1P08559 390 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
RTF1-201ENST00000389629 CUL1Q13616 776 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 MYCT1Q8N699 235 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 ARMC2Q8NEN0 867 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 PIGSQ96S52 555 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 MTA3Q9BTC8 594 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 FBXL5Q9UKA1 691 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 SCP2P22307 547 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 TRAPPC11Q7Z392 1133 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 SNX24Q9Y343 169 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 SLC1A4P43007 532 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 CAPRIN2Q6IMN6 1127 aaKnown RBP15.53■□□□□ 0.08
RTF1-201ENST00000389629 NAP1L4Q99733 375 aaKnown RBP15.53■□□□□ 0.08
RTF1-201ENST00000389629 ZMYND12Q9H0C1 365 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 VPS37BQ9H9H4 285 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
RTF1-201ENST00000389629 BAG2O95816 211 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 FGGP02679 453 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 SRGNP10124 158 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 MECOMQ03112 1051 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 BIRC3Q13489 604 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 COA7Q96BR5 231 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 BRIP1Q9BX63 1249 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 RASGRF2O14827 1237 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 RIMBP2O15034 1052 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 KRT5P13647 590 aa15.52■□□□□ 0.08
RTF1-201ENST00000389629 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
RTF1-201ENST00000389629 ADCY8P40145 1251 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 GJA10Q969M2 543 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 TSC22D3Q99576 134 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 CARD10Q9BWT7 1032 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 DIP2AQ14689 1571 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 CDKAL1Q5VV42 579 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 CYFIP2Q96F07 1278 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 PBKQ96KB5 322 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 EHMT1Q9H9B1 1298 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 STK17AQ9UEE5 414 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 USH1CQ9Y6N9 552 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 PXDNQ92626 1479 aa15.52■□□□□ 0.07
RTF1-201ENST00000389629 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 UFL1O94874 794 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
RTF1-201ENST00000389629 FBXL16Q8N461 479 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 BICD1Q96G01 975 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 ZBTB21Q9ULJ3 1066 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 USTQ9Y2C2 406 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 EXOC3O60645 756 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 LRRC63Q05C16 580 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
RTF1-201ENST00000389629 LRRC14Q15048 493 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 CHMP6Q96FZ7 201 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 LACRTQ9GZZ8 138 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 KANSL2Q9H9L4 492 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 PKD2L1Q9P0L9 805 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
RTF1-201ENST00000389629 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 XDHP47989 1333 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 CYP2J2P51589 502 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 MESDQ14696 234 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 DAPK3O43293 454 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 SARSP49591 514 aaKnown RBP15.51■□□□□ 0.07
RTF1-201ENST00000389629 PPP2R5EQ16537 467 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 PSTPIP2Q9H939 334 aa15.51■□□□□ 0.07
RTF1-201ENST00000389629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
RTF1-201ENST00000389629 POTEMA6NI47 508 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 GAS8O95995 478 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 CSF1RP07333 972 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 PTGISQ16647 500 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 USH1GQ495M9 461 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 RIMS1Q86UR5 1692 aaKnown RBP15.5■□□□□ 0.07
RTF1-201ENST00000389629 DIAPH2O60879 1101 aa15.5■□□□□ 0.07
RTF1-201ENST00000389629 ACSL3O95573 720 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms