RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 OTOP1Q7RTM1 612 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 PPP1R13BQ96KQ4 1090 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 TRERF1Q96PN7 1200 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 CHP1Q99653 195 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 BAG1Q99933 345 aaPredicted RBP11.32□□□□□ -0.6
LTN1-203ENST00000389195 ZNF577Q9BSK1 485 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 CRACR2AQ9BSW2 395 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 EPHB6O15197 1021 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 PRPF6O94906 941 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 SLITRK3O94933 977 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 CYP3A7P24462 503 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 TBX2Q13207 712 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 EAPPQ56P03 285 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 UTP14CQ5TAP6 766 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 ZBTB9Q96C00 473 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 UNC45AQ9H3U1 944 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 ZNF408Q9H9D4 720 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 KCNH7Q9NS40 1196 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 VWA5AO00534 786 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 GAS7O60861 476 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 ICAM1P05362 532 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 TPM3P06753 285 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 MYBP10242 640 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 VGLL4Q14135 290 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 LZTFL1Q9NQ48 299 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 IMPACTQ9P2X3 320 aa11.31□□□□□ -0.6
LTN1-203ENST00000389195 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
LTN1-203ENST00000389195 IPO5O00410 1097 aaKnown RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SOX10P56693 466 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 GSDMDP57764 484 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 AMPD3Q01432 767 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 KCNB1Q14721 858 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 TMEM132BQ14DG7 1078 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 GPC2Q8N158 579 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 ACRBPQ8NEB7 543 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 TTC26A0AVF1 554 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 CLIC2O15247 247 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 MMP14P50281 582 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 Q4G0T1 1027 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
LTN1-203ENST00000389195 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
LTN1-203ENST00000389195 SSC5DA1L4H1 1573 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 TRAF5O00463 557 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 CCNE1P24864 410 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 NMT1P30419 496 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 PBX1P40424 430 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 COG2Q14746 738 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 SCFD1Q8WVM8 642 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 MBOAT7Q96N66 472 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 SH2D4AQ9H788 454 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 MRPL44Q9H9J2 332 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.6
LTN1-203ENST00000389195 FAM207AQ9NSI2 230 aaPredicted RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 DNM3Q9UQ16 869 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 TISP43B9A030 160 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 WDR46O15213 610 aaKnown RBP11.29□□□□□ -0.6
LTN1-203ENST00000389195 PSMD10O75832 226 aa11.29□□□□□ -0.6
LTN1-203ENST00000389195 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms