RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 RNASELQ05823 741 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 SPATS2Q86XZ4 545 aaKnown RBP16.78■□□□□ 0.28
ALK-201ENST00000389048 TTC17Q96AE7 1141 aa16.78■□□□□ 0.28
ALK-201ENST00000389048 DNAJC6O75061 913 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 TADA3O75528 432 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 MAP7D3Q8IWC1 876 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 KCNA6P17658 529 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 KRT33BQ14525 404 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 ESRRAP11474 423 aaPredicted RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 EPHB4P54760 987 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 CHRNDQ07001 517 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 HSP90AA5PQ58FG0 334 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 THEGQ9P2T0 379 aa16.77■□□□□ 0.28
ALK-201ENST00000389048 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
ALK-201ENST00000389048 CAPRIN1Q14444 709 aaKnown RBP16.77■□□□□ 0.27
ALK-201ENST00000389048 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 TRIML2Q8N7C3 387 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 NFU1Q9UMS0 254 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 RGS9BPQ6ZS82 235 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 NR1H4Q96RI1 486 aaPredicted RBP16.77■□□□□ 0.27
ALK-201ENST00000389048 ZSWIM6Q9HCJ5 1215 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 PCDHA13Q9Y5I0 950 aa16.77■□□□□ 0.27
ALK-201ENST00000389048 MTERF2Q49AM1 385 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 PPP1R36Q96LQ0 422 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 ABI1Q8IZP0 508 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 GANCQ8TET4 914 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
ALK-201ENST00000389048 ZNF500O60304 480 aaPredicted RBP16.76■□□□□ 0.27
ALK-201ENST00000389048 HLA-DPA1P20036 260 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 PHKA1P46020 1223 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 GOLGA8CPA6NN73 597 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 FBXW4P57775 412 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 ABCB6Q9NP58 842 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
ALK-201ENST00000389048 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 NRBP2Q9NSY0 501 aa16.76■□□□□ 0.27
ALK-201ENST00000389048 EPHB1P54762 984 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 RPS8P62241 208 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 NR5A1Q13285 461 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 DNAJC24Q6P3W2 148 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 IQCDQ96DY2 449 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 SPZ1Q9BXG8 430 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 TRPV6Q9H1D0 765 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 FAM160B1Q5W0V3 765 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 FAM167BQ9BTA0 163 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 GREM2Q9H772 168 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 LMTK3Q96Q04 1460 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 C16orf87Q6PH81 154 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 P2RX5Q93086 422 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 PIGSQ96S52 555 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 PGRMC1O00264 195 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 LONP1P36776 959 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 FAM47EQ6ZV65 393 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 HEMGNQ9BXL5 484 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 YIPF3Q9GZM5 350 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 PRKAB2O43741 272 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 CLCN6P51797 869 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 KCNQ4P56696 695 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
ALK-201ENST00000389048 DR1Q01658 176 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 ATG16L1Q676U5 607 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 NUDCD1Q96RS6 583 aa16.75■□□□□ 0.27
ALK-201ENST00000389048 PMLP29590 882 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 CCDC90BQ9GZT6 254 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 DRC3Q9H069 523 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 TRPC5Q9UL62 973 aaPredicted RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 PLAAQ9Y263 795 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 JRKLQ9Y4A0 524 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 CTTNQ14247 550 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms