RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PPTC7Q8NI37 304 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 PPP1R13LQ8WUF5 828 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 CRYGNQ8WXF5 182 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 EMID1Q96A84 441 aaPredicted RBP22.05■■□□□ 1.12
GTF3A-201ENST00000381140 ELP1O95163 1332 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 A0A0U1RQG5 324 aaPredicted RBP22.04■■□□□ 1.12
GTF3A-201ENST00000381140 MEIS1O00470 390 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 KPNA6O60684 536 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 PQBP1O60828 265 aaKnown RBP22.04■■□□□ 1.12
GTF3A-201ENST00000381140 MMP1P03956 469 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 ZNF286BP0CG31 522 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 METTL7BQ6UX53 244 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 GIMAP8Q8ND71 665 aaPredicted RBP22.04■■□□□ 1.12
GTF3A-201ENST00000381140 NR2E3Q9Y5X4 410 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 CEP290O15078 2479 aa22.04■■□□□ 1.12
GTF3A-201ENST00000381140 MAFGO15525 162 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 TLE2Q04725 743 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 ITGA7Q13683 1181 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 DIS3L2Q8IYB7 885 aaKnown RBP22.03■■□□□ 1.12
GTF3A-201ENST00000381140 SENP7Q9BQF6 1050 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 SDF4Q9BRK5 362 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 AGO4Q9HCK5 861 aaKnown RBP22.03■■□□□ 1.12
GTF3A-201ENST00000381140 ZMYND8Q9ULU4 1186 aaPredicted RBP22.03■■□□□ 1.12
GTF3A-201ENST00000381140 TELO2Q9Y4R8 837 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 KAT6AQ92794 2004 aa22.03■■□□□ 1.12
GTF3A-201ENST00000381140 IGLV3-22A0A075B6J6 115 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 BTBD18B2RXH4 712 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 DDX39AO00148 427 aaKnown RBP22.02■■□□□ 1.12
GTF3A-201ENST00000381140 ARVCFO00192 962 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 SYN1P17600 705 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 SNX17Q15036 470 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 SAFBQ15424 915 aaKnown RBP eCLIP22.02■■□□□ 1.12
GTF3A-201ENST00000381140 FAM47CQ5HY64 1035 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 NIPA1Q7RTP0 329 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 PRDM5Q9NQX1 630 aaPredicted RBP22.02■■□□□ 1.12
GTF3A-201ENST00000381140 PCDH10Q9P2E7 1040 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 SMC3Q9UQE7 1217 aa22.02■■□□□ 1.12
GTF3A-201ENST00000381140 TDP2O95551 362 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 GJB2P29033 226 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 USP11P51784 963 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 SETQ01105 290 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-201ENST00000381140 LETM2Q2VYF4 491 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 UTP14CQ5TAP6 766 aaKnown RBP22.01■■□□□ 1.11
GTF3A-201ENST00000381140 GPR20Q99678 358 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 KIF3AQ9Y496 699 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 TRIP12Q14669 1992 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-201ENST00000381140 WDR81Q562E7 1941 aa22.01■■□□□ 1.11
GTF3A-201ENST00000381140 H0YGN5 161 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 EDIL3O43854 480 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 CIITAP33076 1130 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 ITGB3BPQ13352 177 aaPredicted RBP22■■□□□ 1.11
GTF3A-201ENST00000381140 NBPF20Q3BBV1 942 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
GTF3A-201ENST00000381140 ZNF577Q9BSK1 485 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 JPH1Q9HDC5 661 aaPredicted RBP22■■□□□ 1.11
GTF3A-201ENST00000381140 ZSCAN21Q9Y5A6 473 aaPredicted RBP22■■□□□ 1.11
GTF3A-201ENST00000381140 GRIN2DO15399 1336 aa22■■□□□ 1.11
GTF3A-201ENST00000381140 MYH9P35579 1960 aaKnown RBP22■■□□□ 1.11
GTF3A-201ENST00000381140 K7ELQ4 463 aaPredicted RBP21.99■■□□□ 1.11
GTF3A-201ENST00000381140 PPFIA4O75335 1185 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 GNL2Q13823 731 aaKnown RBP21.99■■□□□ 1.11
GTF3A-201ENST00000381140 C1orf53Q5VUE5 145 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 NEK8Q86SG6 692 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 SLC9A2Q9UBY0 812 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 NFASCO94856 1347 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 MROH7Q68CQ1 1323 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 DCDC2CA8MYV0 355 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 IPO5O00410 1097 aaKnown RBP21.99■■□□□ 1.11
GTF3A-201ENST00000381140 PSEN2P49810 448 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 CDK7P50613 346 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 FBXO18Q8NFZ0 1043 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 KAT2BQ92831 832 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 TNFRSF25Q93038 417 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
GTF3A-201ENST00000381140 PRKAG2Q9UGJ0 569 aa21.99■■□□□ 1.11
GTF3A-201ENST00000381140 LGALS2P05162 132 aa21.98■■□□□ 1.11
GTF3A-201ENST00000381140 TCF7P36402 384 aaPredicted RBP21.98■■□□□ 1.11
GTF3A-201ENST00000381140 MFSD10Q14728 455 aa21.98■■□□□ 1.11
GTF3A-201ENST00000381140 TRIM50Q86XT4 487 aa21.98■■□□□ 1.11
GTF3A-201ENST00000381140 LENG9Q96B70 501 aa21.98■■□□□ 1.11
GTF3A-201ENST00000381140 FOXD4L1Q9NU39 408 aa21.98■■□□□ 1.11
GTF3A-201ENST00000381140 DDX25Q9UHL0 483 aaKnown RBP21.98■■□□□ 1.11
GTF3A-201ENST00000381140 GSTTP1A0A1W2PQM5 241 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 TLR3O15455 904 aaKnown RBP21.97■■□□□ 1.11
GTF3A-201ENST00000381140 MSH4O15457 936 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 CCNT1O60563 726 aaKnown RBP21.97■■□□□ 1.11
GTF3A-201ENST00000381140 CLTBP09497 229 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 HOXD8P13378 290 aaPredicted RBP21.97■■□□□ 1.11
GTF3A-201ENST00000381140 ATP2B1P20020 1258 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 CUL4AQ13619 759 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 KIAA0753Q2KHM9 967 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 SH3RF1Q7Z6J0 888 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 SEPT1Q8WYJ6 367 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 GJA10Q969M2 543 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 KATNAL1Q9BW62 490 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 TCEAL9Q9UHQ7 104 aa21.97■■□□□ 1.11
GTF3A-201ENST00000381140 F2P00734 622 aa21.96■■□□□ 1.11
GTF3A-201ENST00000381140 ACTR2P61160 394 aa21.96■■□□□ 1.11
GTF3A-201ENST00000381140 ANKRD33Q7Z3H0 272 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms