RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 MANSC4A6NHS7 340 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-202ENST00000379996 YY1P25490 414 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 AKAP17AQ02040 695 aaKnown RBP8.7□□□□□ -1.02
CDKL5-202ENST00000379996 IL17AQ16552 155 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 CCDC96Q2M329 555 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 RGMBQ6NW40 437 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 GTPBP4Q9BZE4 634 aaKnown RBP8.7□□□□□ -1.02
CDKL5-202ENST00000379996 FZD1Q9UP38 647 aa8.7□□□□□ -1.02
CDKL5-202ENST00000379996 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-202ENST00000379996 FRMPD4Q14CM0 1322 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 PPP1R11O60927 126 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 SLU7O95391 586 aaKnown RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 CBX1P83916 185 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 DPYDQ12882 1025 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 ORC2Q13416 577 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 COG2Q14746 738 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 NR6A1Q15406 480 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 TTBK2Q6IQ55 1244 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 MOB2Q70IA6 237 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 RASGRP2Q7LDG7 609 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 SMC2O95347 1197 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 GOLGA8HP0CJ92 632 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 SFPQP23246 707 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 HMGCS2P54868 508 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 ETF1P62495 437 aaKnown RBP8.69□□□□□ -1.02
CDKL5-202ENST00000379996 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 ELF2Q15723 593 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 C4orf32Q8N8J7 132 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 PIGSQ96S52 555 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 MTRQ99707 1265 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 AMNQ9BXJ7 453 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 CSRNP2Q9H175 543 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 RIC8AQ9NPQ8 531 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
CDKL5-202ENST00000379996 VWA5AO00534 786 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 GPR37L1O60883 481 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 TADA3O75528 432 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 CD46P15529 392 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 QRICH1Q2TAL8 776 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 GRAMD1CQ8IYS0 662 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 MLKLQ8NB16 471 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 MYH7BA7E2Y1 1941 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 TM4SF4P48230 202 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 UBASH3AP57075 661 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 ISM2Q6H9L7 571 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 PDXDC2PQ6P474 469 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 GNA11P29992 359 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 APLP1P51693 650 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 SYT10Q6XYQ8 523 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 CCDC84Q86UT8 332 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 CNNM3Q8NE01 707 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 SHCBP1Q8NEM2 672 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 NUP88Q99567 741 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-202ENST00000379996 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
CDKL5-202ENST00000379996 POLR2DO15514 142 aaKnown RBP8.67□□□□□ -1.02
CDKL5-202ENST00000379996 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 ATP2C1P98194 919 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-202ENST00000379996 TRIM29Q14134 588 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 TREML2Q5T2D2 321 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 FBXO11Q86XK2 927 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 UBA5Q9GZZ9 404 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 PLXNB2O15031 1838 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 LOC102724159A0A0B4J2E5 919 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 ZBED4O75132 1171 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 CNMDO75829 334 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 PSEN2P49810 448 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 HSD17B4P51659 736 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 HUNKP57058 714 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 AP3B2Q13367 1082 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 PWP2Q15269 919 aaKnown RBP8.67□□□□□ -1.02
CDKL5-202ENST00000379996 PTPN21Q16825 1174 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 TOGARAM2Q6ZUX3 1019 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 TRAIPQ9BWF2 469 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 C6orf50Q9HD87 102 aa8.67□□□□□ -1.02
CDKL5-202ENST00000379996 ZNF214Q9UL59 606 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-202ENST00000379996 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms