RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CEP55Q53EZ4 464 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 JAKMIP3Q5VZ66 844 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 GPR153Q6NV75 609 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 PSRC1Q6PGN9 363 aaPredicted RBP25.22■■□□□ 1.63
SRM-201ENST00000376957 IL17RAQ96F46 866 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 RNPC3Q96LT9 517 aaKnown RBP25.22■■□□□ 1.63
SRM-201ENST00000376957 SDF4Q9BRK5 362 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 NOC4LQ9BVI4 516 aaKnown RBP25.22■■□□□ 1.63
SRM-201ENST00000376957 C22orf23Q9BZE7 217 aa25.22■■□□□ 1.63
SRM-201ENST00000376957 TUT1Q9H6E5 874 aaKnown RBP25.22■■□□□ 1.63
SRM-201ENST00000376957 CSF2RAP15509 400 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 NEK4P51957 841 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 ARHGAP4P98171 946 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 KAT2BQ92831 832 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 TMEM260Q9NX78 707 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 GTF2IRD1Q9UHL9 959 aa25.21■■□□□ 1.63
SRM-201ENST00000376957 PITPNM1O00562 1244 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 GNAT1P11488 350 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 CYP2C9P11712 490 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 AK2P54819 239 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 SP4Q02446 784 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 SEMA3FQ13275 785 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 GALNT17Q6IS24 598 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 NIPA1Q7RTP0 329 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 CAGE1Q8TC20 777 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 SEPT1Q8WYJ6 367 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 WASF1Q92558 559 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 TNPO1Q92973 898 aaKnown RBP25.2■■□□□ 1.62
SRM-201ENST00000376957 GPR20Q99678 358 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 UPF2Q9HAU5 1272 aaKnown RBP25.2■■□□□ 1.62
SRM-201ENST00000376957 VPS54Q9P1Q0 977 aa25.2■■□□□ 1.62
SRM-201ENST00000376957 HAS3O00219 553 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 PFKFB2O60825 505 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 SLC34A2O95436 690 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 LGALS2P05162 132 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 PFKMP08237 780 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 PGBD1Q96JS3 809 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 C16orf70Q9BSU1 422 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 IL23AQ9NPF7 189 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 KCNH7Q9NS40 1196 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 PCDH10Q9P2E7 1040 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 HDAC6Q9UBN7 1215 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 TCEAL9Q9UHQ7 104 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 TPCN1Q9ULQ1 816 aa25.19■■□□□ 1.62
SRM-201ENST00000376957 PPFIA3O75145 1194 aa25.18■■□□□ 1.62
SRM-201ENST00000376957 KCNA2P16389 499 aa25.18■■□□□ 1.62
SRM-201ENST00000376957 RFC2P35250 354 aa25.18■■□□□ 1.62
SRM-201ENST00000376957 CCL23P55773 120 aa25.18■■□□□ 1.62
SRM-201ENST00000376957 SCRN1Q12765 414 aa25.18■■□□□ 1.62
SRM-201ENST00000376957 JPH1Q9HDC5 661 aaPredicted RBP25.18■■□□□ 1.62
SRM-201ENST00000376957 PARNO95453 639 aaKnown RBP25.17■■□□□ 1.62
SRM-201ENST00000376957 FGBP02675 491 aa25.17■■□□□ 1.62
SRM-201ENST00000376957 CYP3A4P08684 503 aa25.17■■□□□ 1.62
SRM-201ENST00000376957 SETQ01105 290 aaPredicted RBP25.17■■□□□ 1.62
SRM-201ENST00000376957 C9orf50Q5SZB4 431 aa25.17■■□□□ 1.62
SRM-201ENST00000376957 AZI2Q9H6S1 392 aa25.17■■□□□ 1.62
SRM-201ENST00000376957 PKD2L1Q9P0L9 805 aa25.17■■□□□ 1.62
SRM-201ENST00000376957 C17orf102A2RUQ5 167 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 MEIS1O00470 390 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 ATP9AO75110 1047 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 SEC24BO95487 1268 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 TCF7P36402 384 aaPredicted RBP25.16■■□□□ 1.62
SRM-201ENST00000376957 UTP14CQ5TAP6 766 aaKnown RBP25.16■■□□□ 1.62
SRM-201ENST00000376957 GDF6Q6KF10 455 aaPredicted RBP25.16■■□□□ 1.62
SRM-201ENST00000376957 PLA2G4DQ86XP0 818 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 GLG1Q92896 1179 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 SLC9A2Q9UBY0 812 aa25.16■■□□□ 1.62
SRM-201ENST00000376957 NFASCO94856 1347 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 STK36Q9NRP7 1315 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 ACTN1P12814 892 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 PTK7Q13308 1070 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 AFAP1L1Q8TED9 768 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 LRCH3Q96II8 777 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 SMARCAD1Q9H4L7 1026 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 BCAS3Q9H6U6 928 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 ERAP1Q9NZ08 941 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 PCDHA4Q9UN74 947 aa25.15■■□□□ 1.62
SRM-201ENST00000376957 EPHB4P54760 987 aa25.14■■□□□ 1.62
SRM-201ENST00000376957 ZNF365Q70YC5 407 aa25.14■■□□□ 1.62
SRM-201ENST00000376957 PPP1R13LQ8WUF5 828 aa25.14■■□□□ 1.62
SRM-201ENST00000376957 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.14■■□□□ 1.624e-8■■■□□ 16.4
SRM-201ENST00000376957 UMODL1Q5DID0 1318 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.13■■□□□ 1.61
SRM-201ENST00000376957 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.13■■□□□ 1.61
SRM-201ENST00000376957 SOX1O00570 391 aaPredicted RBP25.13■■□□□ 1.61
SRM-201ENST00000376957 USP11P51784 963 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 SMAD3P84022 425 aaKnown RBP25.13■■□□□ 1.61
SRM-201ENST00000376957 C8orf34Q49A92 452 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 TMEM240Q5SV17 173 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 BLIDQ8IZY5 108 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 IL27Q8NEV9 243 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 CYP2W1Q8TAV3 490 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 ATP6V0A1Q93050 837 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 WNT8AQ9H1J5 351 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 AGO4Q9HCK5 861 aaKnown RBP25.13■■□□□ 1.61
SRM-201ENST00000376957 TBC1D22BQ9NU19 505 aa25.13■■□□□ 1.61
SRM-201ENST00000376957 RANBP2P49792 3224 aaKnown RBP25.12■■□□□ 1.61
SRM-201ENST00000376957 IQCF3P0C7M6 154 aa25.12■■□□□ 1.61
SRM-201ENST00000376957 SMIM10L2AP0DMW4 78 aa25.12■■□□□ 1.61
SRM-201ENST00000376957 SMIM10L2BP0DMW5 78 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms