RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SEMA3FQ13275 785 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 NLRX1Q86UT6 975 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 SERINC5Q86VE9 423 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 MICALL1Q8N3F8 863 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 CCDC82Q8N4S0 544 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 ZBED2Q9BTP6 218 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 PSTPIP2Q9H939 334 aa24.21■■□□□ 1.47
VSX1-201ENST00000376707 ABHD14A-ACY1A0A1B0GW23 586 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 SMIM10L2AP0DMW4 78 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 SMIM10L2BP0DMW5 78 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 THPOP40225 353 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 TRAF7Q6Q0C0 670 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 SYNE3Q6ZMZ3 975 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 FANCBQ8NB91 859 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 ATXN2LQ8WWM7 1075 aaKnown RBP24.2■■□□□ 1.46
VSX1-201ENST00000376707 ATP6V0A1Q93050 837 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 GPR20Q99678 358 aa24.2■■□□□ 1.46
VSX1-201ENST00000376707 hCG_1642624A0A1W2PR95 340 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 EFCAB14O75071 495 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 SP4Q02446 784 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 TAP1Q03518 808 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 IKBKEQ14164 716 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 TMTC3Q6ZXV5 915 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 SGMS1Q86VZ5 419 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 ARNTL2Q8WYA1 636 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 SENP7Q9BQF6 1050 aa24.19■■□□□ 1.46
VSX1-201ENST00000376707 ZNF215Q9UL58 517 aaPredicted RBP24.19■■□□□ 1.46
VSX1-201ENST00000376707 TRIP12Q14669 1992 aaPredicted RBP24.19■■□□□ 1.46
VSX1-201ENST00000376707 EMSYQ7Z589 1322 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 VCANP13611 3396 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 RSPH10B2B2RC85 870 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 RFXAPO00287 272 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 GTPBP6O43824 516 aaPredicted RBP24.18■■□□□ 1.46
VSX1-201ENST00000376707 RSPH10BP0C881 870 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 DEFB103AP81534 67 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 TMCO2Q7Z6W1 182 aaPredicted RBP24.18■■□□□ 1.46
VSX1-201ENST00000376707 GIMAP8Q8ND71 665 aaPredicted RBP24.18■■□□□ 1.46
VSX1-201ENST00000376707 TET1Q8NFU7 2136 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 TSPYL2Q9H2G4 693 aaPredicted RBP24.18■■□□□ 1.46
VSX1-201ENST00000376707 RNPEPQ9H4A4 650 aa24.18■■□□□ 1.46
VSX1-201ENST00000376707 LGR5O75473 907 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 ARHGEF15O94989 841 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 GNAT1P11488 350 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 HOXC8P31273 242 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 MBTPS1Q14703 1052 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 TCTN1Q2MV58 587 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 UTP14CQ5TAP6 766 aaKnown RBP24.17■■□□□ 1.46
VSX1-201ENST00000376707 HEATR3Q7Z4Q2 680 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 TRIM50Q86XT4 487 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 CDHR1Q96JP9 859 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 NEK1Q96PY6 1258 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 MYO9BQ13459 2157 aa24.17■■□□□ 1.46
VSX1-201ENST00000376707 SPDYE3A6NKU9 549 aa24.16■■□□□ 1.46
VSX1-201ENST00000376707 TREHO43280 583 aa24.16■■□□□ 1.46
VSX1-201ENST00000376707 CDC45O75419 566 aa24.16■■□□□ 1.46
VSX1-201ENST00000376707 UBE2SQ16763 222 aa24.16■■□□□ 1.46
VSX1-201ENST00000376707 GPRASP2Q96D09 838 aa24.16■■□□□ 1.46
VSX1-201ENST00000376707 EPOPA6NHQ4 379 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 MRPS5P82675 430 aaKnown RBP24.15■■□□□ 1.46
VSX1-201ENST00000376707 APOA5Q6Q788 366 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 CCDC136Q96JN2 1154 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 ASB2Q96Q27 587 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 SETD4Q9NVD3 440 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
VSX1-201ENST00000376707 CHD7Q9P2D1 2997 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 TELO2Q9Y4R8 837 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 MTCH2Q9Y6C9 303 aa24.15■■□□□ 1.46
VSX1-201ENST00000376707 LCHNA4D1U4 455 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 GJB5O95377 273 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 POU3F3P20264 500 aaPredicted RBP24.14■■□□□ 1.45
VSX1-201ENST00000376707 SKIV2LQ15477 1246 aaKnown RBP24.14■■□□□ 1.45
VSX1-201ENST00000376707 TSGA10IPQ3SY00 556 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 DBF4BQ8NFT6 615 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 RAD9AQ99638 391 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 EHMT1Q9H9B1 1298 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 PCDHA6Q9UN73 950 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 PCDHA8Q9Y5H6 950 aa24.14■■□□□ 1.45
VSX1-201ENST00000376707 CAND2O75155 1236 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 CTSHP09668 335 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 ITGB5P18084 799 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 TCF7P36402 384 aaPredicted RBP24.13■■□□□ 1.45
VSX1-201ENST00000376707 ARHGAP4P98171 946 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 MTMR1Q13613 665 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 FAM117BQ6P1L5 589 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 DHX32Q7L7V1 743 aaKnown RBP24.13■■□□□ 1.45
VSX1-201ENST00000376707 IL27Q8NEV9 243 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 TCEANC2Q96MN5 208 aa24.13■■□□□ 1.45
VSX1-201ENST00000376707 ZBTB43O43298 467 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 ATP9AO75110 1047 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 KCNA2P16389 499 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 EXOSC10Q01780 885 aaKnown RBP24.12■■□□□ 1.45
VSX1-201ENST00000376707 RTN1Q16799 776 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 SPRED2Q7Z698 418 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 PKD2L1Q9P0L9 805 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 UBIAD1Q9Y5Z9 338 aa24.12■■□□□ 1.45
VSX1-201ENST00000376707 CNTNAP5Q8WYK1 1306 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 RBAK-RBAKDNI3L0D1 243 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 AMHP03971 560 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 NAPAP54920 295 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms