RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 KCNH7Q9NS40 1196 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 DOCK3Q8IZD9 2030 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.52
PDPN-203ENST00000376061 TLR2O60603 784 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 STAM2O75886 525 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 RGS20O76081 388 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 SLFN14P0C7P3 912 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 PLCG1P19174 1290 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 ADORA2AP29274 412 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 MAPK4P31152 587 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
PDPN-203ENST00000376061 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 NAALADL2Q58DX5 795 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 C17orf99Q6UX52 265 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 GPR142Q7Z601 462 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 GPRASP2Q96D09 838 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 RIT2Q99578 217 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 SDF4Q9BRK5 362 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
PDPN-203ENST00000376061 FOXN1O15353 648 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 CA12O43570 354 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 STRNO43815 780 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
PDPN-203ENST00000376061 STAT6P42226 847 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 PDE4DQ08499 809 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 GRB10Q13322 594 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 GRB14Q14449 540 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 ZRSR1Q15695 479 aaKnown RBP11.76□□□□□ -0.53
PDPN-203ENST00000376061 STXBP2Q15833 593 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 ZNF792Q3KQV3 632 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 TMEM119Q4V9L6 283 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 KRT79Q5XKE5 535 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 NLRX1Q86UT6 975 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 GRAMD1CQ8IYS0 662 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 PNMA5Q96PV4 448 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 PLIN2Q99541 437 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 TEKT3Q9BXF9 490 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 IVNS1ABPQ9Y6Y0 642 aa11.76□□□□□ -0.53
PDPN-203ENST00000376061 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 EML1O00423 815 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 SLC26A4O43511 780 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 CHMP2AO43633 222 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 COBLO75128 1261 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 HYIQ5T013 277 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 SH3RF1Q7Z6J0 888 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 CEP57L1Q8IYX8 460 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 ERCC4Q92889 916 aaPredicted RBP11.75□□□□□ -0.53
PDPN-203ENST00000376061 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
PDPN-203ENST00000376061 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 B4DLN1 442 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 SPATA31C2B4DYI2 1134 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
PDPN-203ENST00000376061 ATP9AO75110 1047 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 MED24O75448 989 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 KCNA2P16389 499 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 ICAM3P32942 547 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 CCT6AP40227 531 aaKnown RBP11.74□□□□□ -0.53
PDPN-203ENST00000376061 MDM2Q00987 491 aaPredicted RBP11.74□□□□□ -0.53
PDPN-203ENST00000376061 PNOCQ13519 176 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 POSTNQ15063 836 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 ECM1Q16610 540 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms