RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PYGLP06737 847 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 RAPGEF1Q13905 1077 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 RCN1Q15293 331 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 C16orf89Q6UX73 402 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 SLC35F6Q8N357 371 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 EZH1Q92800 747 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 SLITRK6Q9H5Y7 841 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 MAP3K20Q9NYL2 800 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 STRIP2Q9ULQ0 834 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBR4-204ENST00000375254 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 O00370 1275 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 OLFML2BQ68BL8 750 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 NECTIN2Q92692 538 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 NACA2Q9H009 215 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 PCDHA13Q9Y5I0 950 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 F8VZ95 297 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 C21orf59P57076 290 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 TRIM69Q86WT6 500 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 CCDC59Q9P031 241 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 IFIT1BQ5T764 474 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 PLAAQ9Y263 795 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 WDR47O94967 919 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 TMEM110-MUSTN1A8MSY1 372 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 TNNI2P48788 182 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 EHHADHQ08426 723 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 CEP85Q6P2H3 762 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 MAGED4Q96JG8 741 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 ZBTB7BO15156 539 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 ARL1P40616 181 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 PPP2R3CQ969Q6 453 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 RBM42Q9BTD8 480 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 GPR141Q7Z602 305 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 LSG1Q9H089 658 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 MCM10Q7L590 875 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 PPP6R2O75170 966 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 SCTRP47872 440 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 GYS2P54840 703 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 MAP3K5Q99683 1374 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 KLHL33A6NCF5 533 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 OCM2P0CE71 109 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 OCMP0CE72 109 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 FNTAP49354 379 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 RPS6KA3P51812 740 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 PLTPP55058 493 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 PDCLQ13371 301 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 CDHR1Q96JP9 859 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 HEXIM1O94992 359 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 ATP6V1E1P36543 226 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 MPRIPQ6WCQ1 1025 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 ZNF554Q86TJ5 538 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 DBF4Q9UBU7 674 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 C21orf2O43822 256 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 NDUFA10O95299 355 aa7.12□□□□□ -1.27
UBR4-204ENST00000375254 HADHQ16836 314 aaKnown RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 ARPC4-TTLL3A0A0A6YYG9 625 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 MYO1FO00160 1098 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 ASS1P00966 412 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 DR1Q01658 176 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 RUNX1T1Q06455 604 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 BBS9Q3SYG4 887 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 THOC7Q6I9Y2 204 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 TMED8Q6PL24 325 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 COPG2Q9UBF2 871 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 BIRC5O15392 142 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 CPP00450 1065 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 LDHCP07864 332 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SOX6P35712 828 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 MAPRE2Q15555 327 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SLC17A8Q8NDX2 589 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 LTV1Q96GA3 475 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 EURLQ9NYK6 297 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SERPING1P05155 500 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 RBM46Q8TBY0 533 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 KAT14Q9H8E8 782 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 KLHL20Q9Y2M5 609 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 ATP4AP20648 1035 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 LRRC63Q05C16 580 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 PRUNE1Q86TP1 453 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 CYFIP2Q96F07 1278 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 RHOBTB2Q9BYZ6 727 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 FBXO28Q9NVF7 368 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 POLR3EQ9NVU0 708 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 LRRC31Q6UY01 552 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 OTUD5Q96G74 571 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 TMOD4Q9NZQ9 345 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SPEF1Q9Y4P9 236 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 BAG3O95817 575 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 UQCRFS1P1P0C7P4 283 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 TRAPPC10P48553 1259 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 GSCP56915 257 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 NFRKBQ6P4R8 1299 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 MICALL2Q8IY33 904 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 APOL4Q9BPW4 351 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 FAM83GA6ND36 823 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms