RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 PNMA2Q9UL42 364 aa20.56■□□□□ 0.88
H2AFX-201ENST00000375167 CHD8Q9HCK8 2581 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 MAP1BP46821 2468 aaKnown RBP20.55■□□□□ 0.88
H2AFX-201ENST00000375167 DNAJB1P25685 340 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 TDO2P48775 406 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 HIC1Q14526 733 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 HSP90AB4PQ58FF6 505 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 PPTC7Q8NI37 304 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 EMID1Q96A84 441 aaPredicted RBP20.55■□□□□ 0.88
H2AFX-201ENST00000375167 NEK1Q96PY6 1258 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 TLE6Q9H808 572 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 DLL3Q9NYJ7 618 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 STX8Q9UNK0 236 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 NR2E1Q9Y466 385 aa20.55■□□□□ 0.88
H2AFX-201ENST00000375167 CHD6Q8TD26 2715 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 BRD1O95696 1058 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 ITGB1P05556 798 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 SP100P23497 879 aaPredicted RBP20.54■□□□□ 0.88
H2AFX-201ENST00000375167 TFAP4Q01664 338 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 RASGRP2Q7LDG7 609 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 RHPN1Q8TCX5 695 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 MTMR7Q9Y216 660 aa20.54■□□□□ 0.88
H2AFX-201ENST00000375167 MYH7BA7E2Y1 1941 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 SRGAP2BP0DMP2 458 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 SYDE2Q5VT97 1194 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 SPPL3Q8TCT6 385 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 HINFPQ9BQA5 517 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 ATRXP46100 2492 aa20.53■□□□□ 0.88
H2AFX-201ENST00000375167 MYO10Q9HD67 2058 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 C17orf102A2RUQ5 167 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 SLC16A2P36021 539 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 ANGPT1Q15389 498 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 POF1BQ8WVV4 589 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 OSBPL7Q9BZF2 842 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 TSHZ2Q9NRE2 1034 aa20.52■□□□□ 0.88
H2AFX-201ENST00000375167 ZNF689Q96CS4 500 aaPredicted RBP20.51■□□□□ 0.87
H2AFX-201ENST00000375167 HAUS7Q99871 368 aa20.51■□□□□ 0.87
H2AFX-201ENST00000375167 SPTBN2O15020 2390 aa20.5■□□□□ 0.87
H2AFX-201ENST00000375167 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
H2AFX-201ENST00000375167 KLHL23Q8NBE8 558 aa20.5■□□□□ 0.87
H2AFX-201ENST00000375167 ATP8B4Q8TF62 1192 aa20.5■□□□□ 0.87
H2AFX-201ENST00000375167 CDCA3Q99618 268 aaPredicted RBP20.5■□□□□ 0.87
H2AFX-201ENST00000375167 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
H2AFX-201ENST00000375167 EPB41L4AQ9HCS5 686 aaPredicted RBP20.5■□□□□ 0.87
H2AFX-201ENST00000375167 DDX41Q9UJV9 622 aaKnown RBP20.5■□□□□ 0.87
H2AFX-201ENST00000375167 MRPL42Q9Y6G3 142 aaKnown RBP20.5■□□□□ 0.87
H2AFX-201ENST00000375167 SLC3A2P08195 630 aaKnown RBP20.49■□□□□ 0.87
H2AFX-201ENST00000375167 HOXD8P13378 290 aaPredicted RBP20.49■□□□□ 0.87
H2AFX-201ENST00000375167 ATP5JP18859 108 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 TTC3P53804 2025 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 STXBP2Q15833 593 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 FLCNQ8NFG4 579 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 PLXNA4Q9HCM2 1894 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 MRVI1Q9Y6F6 885 aa20.49■□□□□ 0.87
H2AFX-201ENST00000375167 PPFIA4O75335 1185 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 APPP05067 770 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 RBM10P98175 930 aaKnown RBP20.48■□□□□ 0.87
H2AFX-201ENST00000375167 TTBK2Q6IQ55 1244 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
H2AFX-201ENST00000375167 VN1R2Q8NFZ6 395 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 CFAP47Q6ZTR5 3102 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 PKD1L2Q7Z442 2459 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 WDR19Q8NEZ3 1342 aa20.48■□□□□ 0.87
H2AFX-201ENST00000375167 PER2O15055 1255 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 TREHO43280 583 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 DGKIO75912 1065 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 GNAT2P19087 354 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 CWF19L1Q69YN2 538 aaKnown RBP20.47■□□□□ 0.87
H2AFX-201ENST00000375167 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 NSUN6Q8TEA1 469 aaKnown RBP20.47■□□□□ 0.87
H2AFX-201ENST00000375167 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 OTOGLQ3ZCN5 2332 aa20.47■□□□□ 0.87
H2AFX-201ENST00000375167 AOC1P19801 751 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 HOXC8P31273 242 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 DUSP6Q16828 381 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
H2AFX-201ENST00000375167 S1PR5Q9H228 398 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 SMOC2Q9H3U7 446 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 TSPY2A6NKD2 308 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 SMIM10L2AP0DMW4 78 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 SMIM10L2BP0DMW5 78 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 RSPO4Q2I0M5 234 aaPredicted RBP20.46■□□□□ 0.87
H2AFX-201ENST00000375167 ANKRD54Q6NXT1 300 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 DTWD2Q8NBA8 298 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 RUBCNQ92622 972 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
H2AFX-201ENST00000375167 USP24Q9UPU5 2620 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 TECP42680 631 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 SPATA33Q96N06 139 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 RTP3Q9BQQ7 232 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 APOL5Q9BWW9 433 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms