RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CYP27A1Q02318 531 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 DDR1Q08345 913 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 FILIP1LQ4L180 1135 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ARL6IP4Q66PJ3 421 aaKnown RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 ANKRD40Q6AI12 368 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 TTI2Q6NXR4 508 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CC2D1AQ6P1N0 951 aaPredicted RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 ZNF804AQ7Z570 1209 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CABP7Q86V35 215 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CERS5Q8N5B7 392 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CCDC155Q8N6L0 562 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 NOA1Q8NC60 698 aaKnown RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 PXYLP1Q8TE99 480 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 RPGRQ92834 1020 aaKnown RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 ANKZF1Q9H8Y5 726 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 KBTBD4Q9NVX7 518 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 FOCADQ5VW36 1801 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ICMTO60725 284 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 PPP1R11O60927 126 aaPredicted RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 BAG3O95817 575 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 BDNFP23560 247 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 HERVK_113P62684 666 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ST5P78524 1137 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 AMPD3Q01432 767 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 PTK7Q13308 1070 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 LRRC41Q15345 812 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 KCTD19Q17RG1 926 aaPredicted RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 UTP14CQ5TAP6 766 aaKnown RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 TMCO3Q6UWJ1 677 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 C16orf86Q6ZW13 317 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ZFPM1Q8IX07 1006 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 KIAA0895Q8NCT3 520 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ZNF507Q8TCN5 953 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 SMCR8Q8TEV9 937 aaPredicted RBP7.12□□□□□ -1.27
CHD6-202ENST00000373222 TRIM9Q9C026 710 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 LACRTQ9GZZ8 138 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 ZMYND12Q9H0C1 365 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 SPC25Q9HBM1 224 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 DAGLAQ9Y4D2 1042 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 GPR75-ASB3A0A0A6YYF3 556 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 SERPINB2P05120 415 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 OR52Z1P0C646 297 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 TXLNAP40222 546 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 PPP4CP60510 307 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 ASIC1P78348 528 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 MRPS25P82663 173 aaKnown RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 APBA1Q02410 837 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 DPP8Q6V1X1 898 aaPredicted RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 KRT26Q7Z3Y9 468 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 CNGA4Q8IV77 575 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 CSGALNACT2Q8N6G5 542 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 MB21D1Q8N884 522 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 GIMAP8Q8ND71 665 aaPredicted RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 TBC1D16Q8TBP0 767 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 ANKS1AQ92625 1134 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 CTAGE1Q96RT6 745 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 FGFBP2Q9BYJ0 223 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 LEMD3Q9Y2U8 911 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 MYMKA6NI61 221 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 H3BQF6 201 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 KIF5CO60282 957 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 N4BP1O75113 896 aaKnown RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 RHOBTB3O94955 611 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 NDUFA10O95299 355 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 PDHBP11177 359 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 SNAP25P60880 206 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 NFIAQ12857 509 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 MIIPQ5JXC2 388 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 KCTD1Q719H9 257 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 RNF34Q969K3 372 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 CAPZA3Q96KX2 299 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 GDAP1L1Q96MZ0 367 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 NOL10Q9BSC4 688 aaKnown RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 TUBGCP2Q9BSJ2 902 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 GTPBP4Q9BZE4 634 aaKnown RBP7.11□□□□□ -1.27
CHD6-202ENST00000373222 SEMA6BQ9H3T3 888 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 POLD4Q9HCU8 107 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 SH3GLB2Q9NR46 395 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 BLOC1S4Q9NUP1 217 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 GGA1Q9UJY5 639 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 THSD7AQ9UPZ6 1657 aa7.11□□□□□ -1.27
CHD6-202ENST00000373222 ANKRD31Q8N7Z5 1873 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 LGALS16A8MUM7 142 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 ZNF263O14978 683 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 ZNF185O15231 689 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 ATP1A1P05023 1023 aaKnown RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 ARHGAP4P98171 946 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 GRB10Q13322 594 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 NONOQ15233 471 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHD6-202ENST00000373222 NEK8Q86SG6 692 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 NEDD1Q8NHV4 660 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms