RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 USP11P51784 963 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 SP4Q02446 784 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 PRR16Q569H4 304 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 NIPA1Q7RTP0 329 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 PPTC7Q8NI37 304 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 STARD7Q9NQZ5 370 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 TELO2Q9Y4R8 837 aa28.67■■■□□ 2.18
C9orf50-201ENST00000372478 MAFGO15525 162 aa28.66■■■□□ 2.18
C9orf50-201ENST00000372478 SAFBQ15424 915 aaKnown RBP eCLIP28.66■■■□□ 2.18
C9orf50-201ENST00000372478 METTL7BQ6UX53 244 aa28.66■■■□□ 2.18
C9orf50-201ENST00000372478 SLC39A5Q6ZMH5 540 aa28.66■■■□□ 2.18
C9orf50-201ENST00000372478 AGO4Q9HCK5 861 aaKnown RBP28.66■■■□□ 2.18
C9orf50-201ENST00000372478 POLR3EQ9NVU0 708 aa28.66■■■□□ 2.18
C9orf50-201ENST00000372478 KIF3AQ9Y496 699 aa28.66■■■□□ 2.18
C9orf50-201ENST00000372478 PURAQ00577 322 aaKnown RBP28.65■■■□□ 2.18
C9orf50-201ENST00000372478 DPF3Q92784 378 aa28.65■■■□□ 2.18
C9orf50-201ENST00000372478 TDP2O95551 362 aa28.65■■■□□ 2.18
C9orf50-201ENST00000372478 GIMAP8Q8ND71 665 aaPredicted RBP28.65■■■□□ 2.18
C9orf50-201ENST00000372478 PSMC6P62333 389 aa28.64■■■□□ 2.18
C9orf50-201ENST00000372478 ITGB3BPQ13352 177 aaPredicted RBP28.64■■■□□ 2.18
C9orf50-201ENST00000372478 LETM2Q2VYF4 491 aa28.64■■■□□ 2.18
C9orf50-201ENST00000372478 LENG9Q96B70 501 aa28.64■■■□□ 2.18
C9orf50-201ENST00000372478 FOXD4L1Q9NU39 408 aa28.64■■■□□ 2.18
C9orf50-201ENST00000372478 NOP56O00567 594 aaKnown RBP28.63■■■□□ 2.17
C9orf50-201ENST00000372478 SETQ01105 290 aaPredicted RBP28.63■■■□□ 2.17
C9orf50-201ENST00000372478 DGKDQ16760 1214 aa28.63■■■□□ 2.17
C9orf50-201ENST00000372478 NEK8Q86SG6 692 aa28.63■■■□□ 2.17
C9orf50-201ENST00000372478 MTG1Q9BT17 334 aaPredicted RBP28.63■■■□□ 2.17
C9orf50-201ENST00000372478 ELP1O95163 1332 aa28.63■■■□□ 2.17
C9orf50-201ENST00000372478 CABYRO75952 493 aa28.62■■■□□ 2.17
C9orf50-201ENST00000372478 RTP1P59025 263 aa28.62■■■□□ 2.17
C9orf50-201ENST00000372478 KPNA6O60684 536 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 ZNF286BP0CG31 522 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 TRIM60Q495X7 471 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 PPP1R13LQ8WUF5 828 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 GPR20Q99678 358 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 SDF4Q9BRK5 362 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 ZNF577Q9BSK1 485 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 ATP11BQ9Y2G3 1177 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 SCN10AQ9Y5Y9 1956 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 PDE4DIPQ5VU43 2346 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 GRIN2DO15399 1336 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 DDX39AO00148 427 aaKnown RBP28.61■■■□□ 2.17
C9orf50-201ENST00000372478 IPO5O00410 1097 aaKnown RBP28.61■■■□□ 2.17
C9orf50-201ENST00000372478 CHMP4BP1P59074 171 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 SNX17Q15036 470 aa28.61■■■□□ 2.17
C9orf50-201ENST00000372478 JPH1Q9HDC5 661 aaPredicted RBP28.61■■■□□ 2.17
C9orf50-201ENST00000372478 NFASCO94856 1347 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 CYP3A7-CYP3A51PA0A087WV96 503 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 A0A0U1RQG5 324 aaPredicted RBP28.6■■■□□ 2.17
C9orf50-201ENST00000372478 EVI5O60447 810 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 PPFIA4O75335 1185 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 HOXD8P13378 290 aaPredicted RBP28.6■■■□□ 2.17
C9orf50-201ENST00000372478 CYP3A7P24462 503 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 C7orf61Q8IZ16 206 aa28.6■■■□□ 2.17
C9orf50-201ENST00000372478 KIF28PB7ZC32 967 aa28.59■■■□□ 2.17
C9orf50-201ENST00000372478 ITGA7Q13683 1181 aa28.59■■■□□ 2.17
C9orf50-201ENST00000372478 GNL2Q13823 731 aaKnown RBP28.59■■■□□ 2.17
C9orf50-201ENST00000372478 MOXD1Q6UVY6 613 aa28.59■■■□□ 2.17
C9orf50-201ENST00000372478 MBOAT7Q96N66 472 aa28.59■■■□□ 2.17
C9orf50-201ENST00000372478 FOXP1Q9H334 677 aaPredicted RBP28.59■■■□□ 2.17
C9orf50-201ENST00000372478 SLC9A2Q9UBY0 812 aa28.59■■■□□ 2.17
C9orf50-201ENST00000372478 DDX25Q9UHL0 483 aaKnown RBP28.59■■■□□ 2.17
C9orf50-201ENST00000372478 MSH4O15457 936 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 SLC37A4O43826 429 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 CCNT1O60563 726 aaKnown RBP28.58■■■□□ 2.17
C9orf50-201ENST00000372478 Q4G0T1 1027 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 KAT2BQ92831 832 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 GJA10Q969M2 543 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 H3BQV1 296 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 ARVCFO00192 962 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 DHX15O43143 795 aaKnown RBP28.58■■■□□ 2.17
C9orf50-201ENST00000372478 HSP90AA1P07900 732 aaKnown RBP28.58■■■□□ 2.17
C9orf50-201ENST00000372478 C1orf53Q5VUE5 145 aa28.58■■■□□ 2.17
C9orf50-201ENST00000372478 LARP1BQ659C4 914 aaKnown RBP28.58■■■□□ 2.17
C9orf50-201ENST00000372478 INTS4Q96HW7 963 aaKnown RBP28.58■■■□□ 2.17
C9orf50-201ENST00000372478 GSTTP1A0A1W2PQM5 241 aa28.57■■■□□ 2.16
C9orf50-201ENST00000372478 PQBP1O60828 265 aaKnown RBP28.57■■■□□ 2.16
C9orf50-201ENST00000372478 LGALS2P05162 132 aa28.57■■■□□ 2.16
C9orf50-201ENST00000372478 TLE2Q04725 743 aa28.57■■■□□ 2.16
C9orf50-201ENST00000372478 UTP14CQ5TAP6 766 aaKnown RBP28.57■■■□□ 2.16
C9orf50-201ENST00000372478 WNT7AO00755 349 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 ATP2B1P20020 1258 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 TCF7P36402 384 aaPredicted RBP28.56■■■□□ 2.16
C9orf50-201ENST00000372478 CDK7P50613 346 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 NBPF20Q3BBV1 942 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 MCTP1Q6DN14 999 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 PPP4R3AQ6IN85 833 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 TRIM50Q86XT4 487 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 NOSTRINQ8IVI9 506 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 SEPT1Q8WYJ6 367 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 C16orf70Q9BSU1 422 aa28.56■■■□□ 2.16
C9orf50-201ENST00000372478 CCNE2O96020 404 aa28.55■■■□□ 2.16
C9orf50-201ENST00000372478 F2P00734 622 aa28.55■■■□□ 2.16
C9orf50-201ENST00000372478 GCFC2P16383 781 aaKnown RBP28.55■■■□□ 2.16
C9orf50-201ENST00000372478 ACTR2P61160 394 aa28.55■■■□□ 2.16
C9orf50-201ENST00000372478 SLC43A3Q8NBI5 491 aa28.55■■■□□ 2.16
C9orf50-201ENST00000372478 TBC1D22BQ9NU19 505 aa28.55■■■□□ 2.16
C9orf50-201ENST00000372478 PSEN2P49810 448 aa28.54■■■□□ 2.16
C9orf50-201ENST00000372478 FAM47CQ5HY64 1035 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms