RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CPVLQ9H3G5 476 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 INTS13Q9NVM9 706 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 OGDHLQ9ULD0 1010 aa15.77■□□□□ 0.11
LDB3-204ENST00000372066 ZMYND8Q9ULU4 1186 aaPredicted RBP15.77■□□□□ 0.11
LDB3-204ENST00000372066 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
LDB3-204ENST00000372066 ZBTB5O15062 677 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 CD44P16070 742 aaKnown RBP15.76■□□□□ 0.11
LDB3-204ENST00000372066 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
LDB3-204ENST00000372066 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
LDB3-204ENST00000372066 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
LDB3-204ENST00000372066 AMPD3Q01432 767 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 NR1I3Q14994 352 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
LDB3-204ENST00000372066 MAP3K21Q5TCX8 1036 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 CEP135Q66GS9 1140 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 TMEM179Q6ZVK1 233 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 GPR142Q7Z601 462 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 PLEKHH3Q7Z736 793 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 ADGRF4Q8IZF3 695 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 CUL5Q93034 780 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 MED15Q96RN5 788 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 MTRQ99707 1265 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 JMJD4Q9H9V9 463 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 STK17AQ9UEE5 414 aa15.76■□□□□ 0.11
LDB3-204ENST00000372066 USP17L15C9J2P7 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L13C9JLJ4 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L11C9JVI0 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L18D6R9N7 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L22D6RA61 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L17D6RBQ6 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L19D6RCP7 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L20D6RJB6 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 ARHGAP6O43182 974 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 SLC26A4O43511 780 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 RHOBTB3O94955 611 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 RGS2P41220 211 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP17L24Q0WX57 530 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 PPP4R3AQ6IN85 833 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 TEX2Q8IWB9 1127 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 IGSF22Q8N9C0 903 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 GPCPD1Q9NPB8 672 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 SAMSN1Q9NSI8 373 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 CTNND2Q9UQB3 1225 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 ITIH6Q6UXX5 1313 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 DOCK3Q8IZD9 2030 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 RANBP2P49792 3224 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 GOLGA6L9A6NEM1 432 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 TMEM232C9JQI7 657 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 CLK2P49760 499 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP14P54578 494 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 SYCP1Q15431 976 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 CCL14Q16627 93 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 ABCB5Q2M3G0 1257 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 MORN1Q5T089 497 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 KLHL10Q6JEL2 608 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 NOC3LQ8WTT2 800 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 USP6NLQ92738 828 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 BLZF1Q9H2G9 400 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 ADD3Q9UEY8 706 aaKnown RBP15.75■□□□□ 0.11
LDB3-204ENST00000372066 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
LDB3-204ENST00000372066 LOC285556D6RIA3 1793 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 SOX1O00570 391 aaPredicted RBP15.74■□□□□ 0.11
LDB3-204ENST00000372066 RIOK3O14730 519 aaKnown RBP15.74■□□□□ 0.11
LDB3-204ENST00000372066 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
LDB3-204ENST00000372066 STX10O60499 249 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 SYN1P17600 705 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 CASP1P29466 404 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 CCNA1P78396 465 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 TRIM14Q14142 442 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 PDIA5Q14554 519 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 CALCRLQ16602 461 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 COBLL1Q53SF7 1204 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 WDR78Q5VTH9 848 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 APTXQ7Z2E3 356 aaKnown RBP15.74■□□□□ 0.11
LDB3-204ENST00000372066 GMCL1P1Q8NEA9 526 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 C12orf42Q96LP6 360 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 GDF15Q99988 308 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 NAA15Q9BXJ9 866 aaKnown RBP15.74■□□□□ 0.11
LDB3-204ENST00000372066 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
LDB3-204ENST00000372066 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 CTIFO43310 598 aaKnown RBP15.73■□□□□ 0.11
LDB3-204ENST00000372066 PLCG1P19174 1290 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 CCND3P30281 292 aaPredicted RBP15.73■□□□□ 0.11
LDB3-204ENST00000372066 CATSPERGQ6ZRH7 1159 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 ADSSL1Q8N142 457 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 KIF18AQ8NI77 898 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 ACER1Q8TDN7 264 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms