RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 GTPBP4Q9BZE4 634 aaKnown RBP14.51□□□□□ -0.09
LDB3-203ENST00000372056 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
LDB3-203ENST00000372056 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 CTNND2Q9UQB3 1225 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 GDAQ9Y2T3 454 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 A0A0G2JMZ2 1700 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 CDK11BP21127 795 aaKnown RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 HOXA13P31271 388 aaPredicted RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 RPS6P62753 249 aaKnown RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 PAK1Q13153 545 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 DHX8Q14562 1220 aaKnown RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 PLS1Q14651 629 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 CEP55Q53EZ4 464 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 RGMBQ6NW40 437 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 CCDC150Q8NCX0 1101 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 ERMNQ8TAM6 284 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 SYTL5Q8TDW5 730 aaPredicted RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 CDHR1Q96JP9 859 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 LRRC27Q9C0I9 530 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 BLOC1S4Q9NUP1 217 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 PRCPP42785 496 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 CCZ1BP86790 482 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 CCZ1P86791 482 aaPredicted RBP14.5□□□□□ -0.09
LDB3-203ENST00000372056 AMPD3Q01432 767 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 DGKZQ13574 1117 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 TMEM119Q4V9L6 283 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 KRT79Q5XKE5 535 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 ADSSL1Q8N142 457 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 SNX29Q8TEQ0 813 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 NUDT12Q9BQG2 462 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 NT5C3AQ9H0P0 336 aa14.5□□□□□ -0.09
LDB3-203ENST00000372056 NFIBO00712 420 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 RRP9O43818 475 aaKnown RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 MUTP22033 750 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 GJA5P36382 358 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 SREBF2Q12772 1141 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 ARHGEF16Q5VV41 709 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 ARMCX5Q6P1M9 558 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 NSMFQ6X4W1 530 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 APTXQ7Z2E3 356 aaKnown RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 SAPCD2Q86UD0 394 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 GIMAP8Q8ND71 665 aaPredicted RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 SMCR8Q8TEV9 937 aaPredicted RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 NELFBQ8WX92 580 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 LARP4BQ92615 738 aaKnown RBP14.49□□□□□ -0.09
LDB3-203ENST00000372056 GJA10Q969M2 543 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 CDK5RAP3Q96JB5 506 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 WDR11Q9BZH6 1224 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 TLL2Q9Y6L7 1015 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 KDM3AQ9Y4C1 1321 aa14.49□□□□□ -0.09
LDB3-203ENST00000372056 A0A1B0GTH6 734 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 PDHXO00330 501 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 MEIS1O00470 390 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 STRNO43815 780 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 SKILP12757 684 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 SFPQP23246 707 aaKnown RBP eCLIP14.48□□□□□ -0.09
LDB3-203ENST00000372056 CCND2P30279 289 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 MUM1L1Q5H9M0 696 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 HAUS3Q68CZ6 603 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 SV2BQ7L1I2 683 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 NLRX1Q86UT6 975 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 ANKRD35Q8N283 1001 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 GPRC5AQ8NFJ5 357 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 ETNPPLQ8TBG4 499 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 LENG9Q96B70 501 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 RMDN3Q96TC7 470 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 RIT2Q99578 217 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 MXRA8Q9BRK3 442 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 CYP39A1Q9NYL5 469 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 COL11A1P12107 1806 aaPredicted RBP14.48□□□□□ -0.09
LDB3-203ENST00000372056 TMEM88BA6NKF7 163 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 FAM86B1E9PN63 330 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 FAM86B2P0C5J1 330 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 ASIC1P78348 528 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 BAATQ14032 418 aaPredicted RBP14.48□□□□□ -0.09
LDB3-203ENST00000372056 PRR16Q569H4 304 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 HYIQ5T013 277 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 ABRAQ8N0Z2 381 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 RAD54LQ92698 747 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 PXMP2Q9NR77 195 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 HOMER2Q9NSB8 354 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 EXOC1Q9NV70 894 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 MORF4L1Q9UBU8 362 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 TCEAL9Q9UHQ7 104 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 MAPK8IP1Q9UQF2 711 aa14.48□□□□□ -0.09
LDB3-203ENST00000372056 KIF3CO14782 793 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 MCM6Q14566 821 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 NR1I3Q14994 352 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 ECM1Q16610 540 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 GNPTABQ3T906 1256 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 CNNM4Q6P4Q7 775 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 KCNK18Q7Z418 384 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
LDB3-203ENST00000372056 TBC1D22BQ9NU19 505 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 RIPK3Q9Y572 518 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 UTRNP46939 3433 aa14.47□□□□□ -0.09
LDB3-203ENST00000372056 MYMKA6NI61 221 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 COBLO75128 1261 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms