RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 FLOT2Q14254 428 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 TRIM60Q495X7 471 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 TMTC4Q5T4D3 741 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 SARM1Q6SZW1 724 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 G2E3Q7L622 706 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 FAM186BQ8IYM0 893 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 XAGE3Q8WTP9 111 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 PANX2Q96RD6 677 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 CUEDC2Q9H467 287 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 SLC39A2Q9NP94 309 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 ERCC6L2Q5T890 1561 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 IQCA1LA6NCM1 817 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 ECEL1O95672 775 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 KRT4P19013 534 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 KCNB1Q14721 858 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 TRIM16LQ309B1 348 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 CLEC17AQ6ZS10 378 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
LCA5-201ENST00000369846 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 NHEJ1Q9H9Q4 299 aaPredicted RBP9.25□□□□□ -0.93
LCA5-201ENST00000369846 ANGPTL3Q9Y5C1 460 aa9.25□□□□□ -0.93
LCA5-201ENST00000369846 FAM200BP0CF97 657 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 TMPRSS15P98073 1019 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 DR1Q01658 176 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 AP1B1Q10567 949 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 KCTD21Q4G0X4 260 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 SGO2Q562F6 1265 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CDR2LQ86X02 465 aaPredicted RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 NOSTRINQ8IVI9 506 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 EDC3Q96F86 508 aaKnown RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 DBNDD2Q9BQY9 259 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 AZI2Q9H6S1 392 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 C10orf88Q9H8K7 445 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 RAB20Q9NX57 234 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 TEKT2Q9UIF3 430 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 MSH6P52701 1360 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 GCNT3O95395 438 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 STX1BP61266 288 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 PRAMEP78395 509 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 ADCK5Q3MIX3 580 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 TLK2Q86UE8 772 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 SNX25Q9H3E2 840 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 ZSWIM6Q9HCJ5 1215 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 RGS12O14924 1447 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 LRRIQ3A6PVS8 624 aaPredicted RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 PGM1P36871 562 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CNGA3Q16281 694 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 LRRC31Q6UY01 552 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 FAM43BQ6ZT52 329 aaPredicted RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 CCDC80Q76M96 950 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 SEC16BQ96JE7 1060 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 FAM210AQ96ND0 272 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 RGL1Q9NZL6 768 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CAPN1P07384 714 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 SERPINB1P30740 379 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 SP4Q02446 784 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 ATG16L1Q676U5 607 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 KSR2Q6VAB6 950 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 PLA2G4DQ86XP0 818 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 LINS1Q8NG48 757 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 GABPB2Q8TAK5 448 aaPredicted RBP9.24□□□□□ -0.93
LCA5-201ENST00000369846 MCM9Q9NXL9 1143 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 RTEL1Q9NZ71 1219 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 LCMT1Q9UIC8 334 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 RCOR1Q9UKL0 485 aa9.24□□□□□ -0.93
LCA5-201ENST00000369846 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 UBE3AQ05086 875 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 CUL4BQ13620 913 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 EXOC8Q8IYI6 725 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 ZFYVE19Q96K21 471 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 CCPG1Q9ULG6 757 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 MFAP3LO75121 409 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 MBD4O95243 580 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 RPN1P04843 607 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 PLCB4Q15147 1175 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 BTNL9Q6UXG8 535 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 POMGNT1Q8WZA1 660 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ANKRD2Q9GZV1 360 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 TCP11X1B4DZS4 312 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 E7EWF7 191 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 XPO1O14980 1071 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 GTPBP6O43824 516 aaPredicted RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 KITP10721 976 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 TMOD1P28289 359 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 KIF11P52732 1056 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ARFIP2P53365 341 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms