RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 VAV2P52735 878 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 ARHGAP4P98171 946 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 NFRKBQ6P4R8 1299 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 PLAGL2Q9UPG8 496 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 TCP10L2B9ZVM9 353 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 FKBP3Q00688 224 aaKnown RBP12.73□□□□□ -0.37
RAB39B-201ENST00000369454 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 CASP8Q14790 479 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 HHIPL2Q6UWX4 724 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 HDXQ7Z353 690 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 COL4A3BPQ9Y5P4 624 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
RAB39B-201ENST00000369454 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
RAB39B-201ENST00000369454 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 KCNMA1Q12791 1236 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 ADAM9Q13443 819 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
RAB39B-201ENST00000369454 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 SIAH1Q8IUQ4 282 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAB39B-201ENST00000369454 MYH10P35580 1976 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 LY75O60449 1722 aa12.73□□□□□ -0.37
RAB39B-201ENST00000369454 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 RSPH10B2B2RC85 870 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 MEIS2O14770 477 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 NDUFB10O96000 172 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 RSPH10BP0C881 870 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 SLC7A5Q01650 507 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CATSPER3Q86XQ3 398 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 FAM86B1E9PN63 330 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CFBP00751 764 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 FAM86B2P0C5J1 330 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 ACTN1P12814 892 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CYP11B2P19099 503 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PDE6BP35913 854 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PPP1R2P41236 205 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 ECE1P42892 770 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 DCAF17Q5H9S7 520 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 RIN2Q8WYP3 895 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 SCFD1Q8WVM8 642 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 CSRNP1Q96S65 589 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 PACSIN2Q9UNF0 486 aaPredicted RBP12.72□□□□□ -0.37
RAB39B-201ENST00000369454 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
RAB39B-201ENST00000369454 MYH7BA7E2Y1 1941 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 ZBTB39O15060 712 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 CLIC2O15247 247 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 TACC1O75410 805 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
RAB39B-201ENST00000369454 NT5C3AQ9H0P0 336 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 RAB21Q9UL25 225 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 MYBL2P10244 700 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 NR2F2P24468 414 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 TUBB2AQ13885 445 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
RAB39B-201ENST00000369454 ARSHQ5FYA8 562 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 FAM83BQ5T0W9 1011 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 PODNQ7Z5L7 613 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 ZDHHC15Q96MV8 337 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 AMNQ9BXJ7 453 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 ADAM21Q9UKJ8 722 aa12.71□□□□□ -0.37
RAB39B-201ENST00000369454 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
RAB39B-201ENST00000369454 A0A1W2PRG0 241 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 KCNA1Q09470 495 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 ORC2Q13416 577 aaPredicted RBP12.71□□□□□ -0.38
RAB39B-201ENST00000369454 CCDC181Q5TID7 509 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 SFR1Q86XK3 245 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms