RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CASP1P29466 404 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 DPCR1Q3MIW9 517 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 MMP19Q99542 508 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 DNAJC25-GNG10A0A024R161 153 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 EML1O00423 815 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 IGF2BP3O00425 579 aaKnown RBP eCLIP26.8■■□□□ 1.88
SNX3-203ENST00000368979 DHX15O43143 795 aaKnown RBP26.8■■□□□ 1.88
SNX3-203ENST00000368979 TOMM70O94826 608 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 MYL1P05976 194 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 XRCC6P12956 609 aaKnown RBP eCLIP26.8■■□□□ 1.88
SNX3-203ENST00000368979 RPA1P27694 616 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 DEKP35659 375 aaKnown RBP26.8■■□□□ 1.88
SNX3-203ENST00000368979 ITGB3BPQ13352 177 aaPredicted RBP26.8■■□□□ 1.88
SNX3-203ENST00000368979 CUL4BQ13620 913 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 NLRX1Q86UT6 975 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 TRIML1Q8N9V2 468 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 UNC45AQ9H3U1 944 aa26.8■■□□□ 1.88
SNX3-203ENST00000368979 ADD3Q9UEY8 706 aaKnown RBP26.8■■□□□ 1.88
SNX3-203ENST00000368979 MAFGO15525 162 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 RGS20O76081 388 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 EDNRBP24530 442 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 KCTD2Q14681 263 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 KCNK18Q7Z418 384 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 LARP4BQ92615 738 aaKnown RBP26.79■■□□□ 1.88
SNX3-203ENST00000368979 RAD54LQ92698 747 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 HHIPL1Q96JK4 782 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 GSDMAQ96QA5 445 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 BLZF1Q9H2G9 400 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 EFCC1Q9HA90 598 aa26.79■■□□□ 1.88
SNX3-203ENST00000368979 ADGRA2Q96PE1 1338 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 POTEB3A0JP26 581 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 TMEM88BA6NKF7 163 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 SPATA31C1P0DKV0 1188 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 SEMA3FQ13275 785 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 MORC3Q14149 939 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 POTEBQ6S5H4 581 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 CATSPER3Q86XQ3 398 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 CCDC102AQ96A19 550 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 POLR3CQ9BUI4 534 aaPredicted RBP26.78■■□□□ 1.88
SNX3-203ENST00000368979 TBC1D22BQ9NU19 505 aa26.78■■□□□ 1.88
SNX3-203ENST00000368979 FCER1AP12319 257 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 ZNF165P49910 485 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 STXBP2Q15833 593 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 FAM110CQ1W6H9 321 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 FGD4Q96M96 766 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 EIF2AK1Q9BQI3 630 aaKnown RBP26.77■■□□□ 1.88
SNX3-203ENST00000368979 CBX8Q9HC52 389 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 PKD2L1Q9P0L9 805 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 ABT1Q9ULW3 272 aaKnown RBP26.77■■□□□ 1.88
SNX3-203ENST00000368979 PLXNB2O15031 1838 aa26.77■■□□□ 1.88
SNX3-203ENST00000368979 CHMP2AO43633 222 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 BMP6P22004 513 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 INHBEP58166 350 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 FSTL1Q12841 308 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 WDR78Q5VTH9 848 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 ISM2Q6H9L7 571 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 KIAA1024Q9UPX6 916 aa26.76■■□□□ 1.87
SNX3-203ENST00000368979 ATP9AO75110 1047 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 EIF3JO75822 258 aaKnown RBP26.75■■□□□ 1.87
SNX3-203ENST00000368979 PGK2P07205 417 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 MCM6Q14566 821 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 EPHA7Q15375 998 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 UVSSAQ2YD98 709 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 GNPTABQ3T906 1256 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 SV2BQ7L1I2 683 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 CDHR1Q96JP9 859 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 HSD17B14Q9BPX1 270 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 C7orf25Q9BPX7 421 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 TUFT1Q9NNX1 390 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 AMPD3Q01432 767 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 KCTD17Q8N5Z5 321 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 BPIFA3Q9BQP9 254 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 TRIM9Q9C026 710 aa26.75■■□□□ 1.87
SNX3-203ENST00000368979 POTEFA5A3E0 1075 aa26.74■■□□□ 1.87
SNX3-203ENST00000368979 DDX39AO00148 427 aaKnown RBP26.74■■□□□ 1.87
SNX3-203ENST00000368979 IQCB1Q15051 598 aa26.74■■□□□ 1.87
SNX3-203ENST00000368979 POTEGQ6S5H5 508 aa26.74■■□□□ 1.87
SNX3-203ENST00000368979 IFNL1Q8IU54 200 aa26.74■■□□□ 1.87
SNX3-203ENST00000368979 NAT10Q9H0A0 1025 aaKnown RBP26.74■■□□□ 1.87
SNX3-203ENST00000368979 KIAA1217Q5T5P2 1943 aa26.74■■□□□ 1.87
SNX3-203ENST00000368979 LOC102724159A0A0B4J2E5 919 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 SPATA31C2B4DYI2 1134 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 E9PMD0 336 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 RPN1P04843 607 aaKnown RBP26.73■■□□□ 1.87
SNX3-203ENST00000368979 KCNA2P16389 499 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 MUTP22033 750 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 ICAM3P32942 547 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 PWP2Q15269 919 aaKnown RBP26.73■■□□□ 1.87
SNX3-203ENST00000368979 ABRAQ8N0Z2 381 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 NEK9Q8TD19 979 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 RGL1Q9NZL6 768 aa26.73■■□□□ 1.87
SNX3-203ENST00000368979 B4DLN1 442 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 KLRC4O43908 158 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 SLITRK3O94933 977 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 CYP4A11Q02928 519 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 PDE4DQ08499 809 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 TAF1CQ15572 869 aaPredicted RBP26.72■■□□□ 1.87
SNX3-203ENST00000368979 CNNM4Q6P4Q7 775 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 MIER3Q7Z3K6 550 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 LUZP1Q86V48 1076 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms