RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TDRD12Q587J7 1177 aaKnown RBP20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 SH3BP5LQ7L8J4 393 aa20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
UBQLN4-201ENST00000368309 MEIS2O14770 477 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 TACC1O75410 805 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 ALDH1B1P30837 517 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 RASSF7Q02833 373 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 CCDC65Q8IXS2 484 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 GSPT2Q8IYD1 628 aaKnown RBP20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 IQCDQ96DY2 449 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 FAM198AQ9UFP1 575 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 ANO9A1A5B4 782 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 CYP11B2P19099 503 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 PSMC6P62333 389 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 ARID5AQ03989 594 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 PDXDC1Q6P996 788 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 TRIM58Q8NG06 486 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 SCFD1Q8WVM8 642 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 TRIM34Q9BYJ4 488 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 EIF3JO75822 258 aaKnown RBP20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 ABCB11O95342 1321 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 TUBBP07437 444 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 TNNT3P45378 269 aaPredicted RBP20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 MSL1Q68DK7 614 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 ZDHHC15Q96MV8 337 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 KCNMB3Q9NPA1 279 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 EMILIN3Q9NT22 766 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 SMARCAL1Q9NZC9 954 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 JRKLQ9Y4A0 524 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 PCDHA2Q9Y5H9 948 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 MYH7BA7E2Y1 1941 aa20.01■□□□□ 0.79
UBQLN4-201ENST00000368309 KDM3AQ9Y4C1 1321 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 ARSHQ5FYA8 562 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 PI4KBQ9UBF8 816 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 SNX12Q9UMY4 172 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 FAN1Q9Y2M0 1017 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 CCDC66A2RUB6 948 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 F5H6K3 240 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 BUB1O43683 1085 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 MMP10P09238 476 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 MATR3P43243 847 aaKnown RBP eCLIP20■□□□□ 0.79
UBQLN4-201ENST00000368309 USP11P51784 963 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 POLR2FP61218 127 aaKnown RBP20■□□□□ 0.79
UBQLN4-201ENST00000368309 KLRC3Q07444 240 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 HYIQ5T013 277 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 NLGN1Q8N2Q7 840 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 EHD4Q9H223 541 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 ADAMTSL1Q8N6G6 1762 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 NCK2O43639 380 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 NOL4O94818 638 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 LMAN1P49257 510 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 NAP1L1P55209 391 aaKnown RBP20■□□□□ 0.79
UBQLN4-201ENST00000368309 ARHGAP4P98171 946 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 ICA1Q05084 483 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 NFRKBQ6P4R8 1299 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 CREG2Q8IUH2 290 aa20■□□□□ 0.79
UBQLN4-201ENST00000368309 LSM14BQ9BX40 385 aaKnown RBP20■□□□□ 0.79
UBQLN4-201ENST00000368309 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■□□□ 14.2
UBQLN4-201ENST00000368309 FAM83BQ5T0W9 1011 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 KRT27Q7Z3Y8 459 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 CATSPER3Q86XQ3 398 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 EHD2Q9NZN4 543 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 HNRNPH2P55795 449 aaKnown RBP19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 ADAM9Q13443 819 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 HGSNATQ68CP4 663 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 MKL1Q969V6 931 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 TLR2O60603 784 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 MYBL2P10244 700 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 CASP5P51878 434 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 PODNQ7Z5L7 613 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 NYAP2Q9P242 653 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 FOCADQ5VW36 1801 aa19.99■□□□□ 0.79
UBQLN4-201ENST00000368309 HOXA13P31271 388 aaPredicted RBP19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 EZH2Q15910 746 aaKnown RBP19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 LTBP1Q14766 1721 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 LCA5LO95447 670 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 ASTE1Q2TB18 679 aaPredicted RBP19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 CYP2W1Q8TAV3 490 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 DCAF4Q8WV16 495 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 RPGRIP1Q96KN7 1286 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 DHX36Q9H2U1 1008 aaKnown RBP19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 KCTD10Q9H3F6 313 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 SPICE1Q8N0Z3 855 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 HDAC7Q8WUI4 952 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 MASTLQ96GX5 879 aa19.98■□□□□ 0.79
UBQLN4-201ENST00000368309 FAM86B1E9PN63 330 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 FAM86B2P0C5J1 330 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 PDE6BP35913 854 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 SLC12A3P55017 1021 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 JAG1P78504 1218 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 CYP4A11Q02928 519 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 HSP90B2PQ58FF3 399 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 NAP1L4Q99733 375 aaKnown RBP19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 BCAS3Q9H6U6 928 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 MYH10P35580 1976 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 DNA2P51530 1060 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 SFMBT2Q5VUG0 894 aa19.97■□□□□ 0.79
UBQLN4-201ENST00000368309 SLC30A10Q6XR72 485 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms