RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 C22orf46C9J442 243 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 SMAD7O15105 426 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 STK10O94804 968 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 TCTN3Q6NUS6 607 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 ADAT2Q7Z6V5 191 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 UBXN4Q92575 508 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 DPF3Q92784 378 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 NAF1Q96HR8 494 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 SEC61A2Q9H9S3 476 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 CLEC1BQ9P126 229 aa5.36□□□□□ -1.55
ECHDC1-201ENST00000368287 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 LMO1P25800 156 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 DGCR2P98153 550 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 SLC7A5Q01650 507 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 GRB10Q13322 594 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 MBLAC2Q68D91 279 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 HEATR6Q6AI08 1181 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 RALYLQ86SE5 291 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 GIMAP8Q8ND71 665 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 EXTL1Q92935 676 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 LMF1Q96S06 567 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 TMEM209Q96SK2 561 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 ACTR10Q9NZ32 417 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 CGGBP1Q9UFW8 167 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 ADAM29Q9UKF5 820 aa5.35□□□□□ -1.55
ECHDC1-201ENST00000368287 PPM1BO75688 479 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 FXNQ16595 210 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 CKAP2LQ8IYA6 745 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 PMFBP1Q8TBY8 1022 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 HNRNPLLQ8WVV9 542 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 TOE1Q96GM8 510 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 LRRC37BQ96QE4 947 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 HIRIP3Q9BW71 556 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 KLHL25Q9H0H3 589 aa5.34□□□□□ -1.55
ECHDC1-201ENST00000368287 PLS3P13797 630 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 RBL2Q08999 1139 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 NCAPHQ15003 741 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 MROH9Q5TGP6 573 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 LARP1BQ659C4 914 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 DPY19L2P1Q6NXN4 242 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 VHLLQ6RSH7 139 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 ANKS3Q6ZW76 656 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 EDAQ92838 391 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 ARMC5Q96C12 935 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 FGD4Q96M96 766 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 MMP19Q99542 508 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 TRIM55Q9BYV6 548 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 DTLQ9NZJ0 730 aa5.33□□□□□ -1.56
ECHDC1-201ENST00000368287 U2SURPO15042 1029 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 NAT2P11245 290 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 COMTP21964 271 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 FPR2P25090 351 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 ATXN1P54253 815 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 SOGA3Q5TF21 947 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 KIAA1211LQ6NV74 962 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 RIOX2Q8IUF8 465 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 PCDHB10Q9UN67 800 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 ZNF652Q9Y2D9 606 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 SUGT1Q9Y2Z0 365 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 SLC4A7Q9Y6M7 1214 aa5.32□□□□□ -1.56
ECHDC1-201ENST00000368287 KLF4O43474 513 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 DDAH1O94760 285 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 EPHX1P07099 455 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 TEPPQ6URK8 271 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 CELF2-AS1Q8N7Q2 184 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 MICAL1Q8TDZ2 1067 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 APBA2Q99767 749 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 DLL4Q9NR61 685 aa5.31□□□□□ -1.56
ECHDC1-201ENST00000368287 ADH4P08319 380 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 INF2Q27J81 1249 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 AGBL4Q5VU57 503 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 TMC5Q6UXY8 1006 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 TAX1BP1Q86VP1 789 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 LDLRAD3Q86YD5 345 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 C1orf210Q8IVY1 113 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 FAM178BQ8IXR5 827 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 VOPP1Q96AW1 172 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 RCC1LQ96I51 464 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 PIF1Q9H611 641 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 GPRC5CQ9NQ84 441 aa5.3□□□□□ -1.56
ECHDC1-201ENST00000368287 PCSK5Q92824 1860 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 ANKRD34BA5PLL1 514 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 C1SP09871 688 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 ZNF143P52747 638 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 RPL11P62913 178 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 SCRN1Q12765 414 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 SERINC3Q13530 473 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 CHRNA2Q15822 529 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 CCDC144BQ3MJ40 725 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 NBPF6Q5VWK0 638 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 C6orf15Q6UXA7 325 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 Q6ZUG5 572 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 CEP68Q76N32 757 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 SCUBE1Q8IWY4 988 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms