RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CLSTN1O94985 981 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 FAM83BQ5T0W9 1011 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 CCDC181Q5TID7 509 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 TTBK2Q6IQ55 1244 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 SMCR8Q8TEV9 937 aaPredicted RBP15.77■□□□□ 0.12
CD48-201ENST00000368045 FAM204AQ9H8W3 233 aa15.77■□□□□ 0.12
CD48-201ENST00000368045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.77■□□□□ 0.12
CD48-201ENST00000368045 TBX3O15119 743 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 NOL4O94818 638 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.11
CD48-201ENST00000368045 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.11
CD48-201ENST00000368045 SLC27A3Q5K4L6 730 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 FAM182BQ5T319 152 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 HAUS3Q68CZ6 603 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 GPBP1Q86WP2 473 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 GLIS3Q8NEA6 775 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 MKL1Q969V6 931 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 LSM14BQ9BX40 385 aaKnown RBP15.77■□□□□ 0.11
CD48-201ENST00000368045 KCTD10Q9H3F6 313 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.11
CD48-201ENST00000368045 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
CD48-201ENST00000368045 SSBP05455 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
CD48-201ENST00000368045 CYP11B2P19099 503 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
CD48-201ENST00000368045 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 NNTQ13423 1086 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 EMBQ6PCB8 327 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 CLEC10AQ8IUN9 316 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 CERS5Q8N5B7 392 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 ERMNQ8TAM6 284 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 TEKT1Q969V4 418 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 TLR10Q9BXR5 811 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 ZC3H12CQ9C0D7 883 aaKnown RBP15.76■□□□□ 0.11
CD48-201ENST00000368045 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 NYAP2Q9P242 653 aa15.76■□□□□ 0.11
CD48-201ENST00000368045 GREB1LQ9C091 1923 aaPredicted RBP15.76■□□□□ 0.11
CD48-201ENST00000368045 BTNL10A8MVZ5 291 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 CETN3O15182 167 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 SLC16A2P36021 539 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 SLC1A4P43007 532 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 EPHB4P54760 987 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 RASSF7Q02833 373 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
CD48-201ENST00000368045 DDR1Q08345 913 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 NAB2Q15742 525 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 QRICH1Q2TAL8 776 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 CFAP221Q4G0U5 840 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
CD48-201ENST00000368045 C10orf76Q5T2E6 689 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 KLHDC7AQ5VTJ3 777 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 SPATA31A6Q5VVP1 1343 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 EMILIN3Q9NT22 766 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 STIM2Q9P246 746 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 UBR3Q6ZT12 1888 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 GRID2IPA4D2P6 1211 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 GOLGA6BA6NDN3 693 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 E9PMD0 336 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
CD48-201ENST00000368045 TLR2O60603 784 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 PHACTR2O75167 634 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 MYBL2P10244 700 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 SLC18A3Q16572 532 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 KCTD1Q719H9 257 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 SCFD1Q8WVM8 642 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 CAVIN3Q969G5 261 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 LRRC1Q9BTT6 524 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
CD48-201ENST00000368045 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
CD48-201ENST00000368045 ATP8B3O60423 1300 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 POTEB3A0JP26 581 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 POTECB2RU33 542 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 ONECUT3O60422 494 aaPredicted RBP15.74■□□□□ 0.11
CD48-201ENST00000368045 ZMYND10O75800 440 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 ANXA13P27216 316 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 POLR2FP61218 127 aaKnown RBP15.74■□□□□ 0.11
CD48-201ENST00000368045 ATP2B2Q01814 1243 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 Q4G0T1 1027 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 ALS2CLQ60I27 953 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 POTEBQ6S5H4 581 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 FRMD5Q7Z6J6 570 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
CD48-201ENST00000368045 MXD3Q9BW11 206 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 MRIQ9BWK5 157 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 NLRC4Q9NPP4 1024 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 PLCB1Q9NQ66 1216 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 SALL4Q9UJQ4 1053 aa15.74■□□□□ 0.11
CD48-201ENST00000368045 GOLGA8KD6RF30 607 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
CD48-201ENST00000368045 AGPSO00116 658 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 CES2O00748 559 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 RIMBP2O15034 1052 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 FOSP01100 380 aaPredicted RBP15.73■□□□□ 0.11
CD48-201ENST00000368045 KRT18P05783 430 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms