RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 HIPK4Q8NE63 616 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
PRKN-206ENST00000366898 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
PRKN-206ENST00000366898 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
PRKN-206ENST00000366898 ZNF185O15231 689 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 ECEL1O95672 775 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 PYGLP06737 847 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 GUCY1A2P33402 732 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 KRT2P35908 639 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 CHMP6Q96FZ7 201 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 LRRC1Q9BTT6 524 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 TXLNGQ9NUQ3 528 aa12.75□□□□□ -0.37
PRKN-206ENST00000366898 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CASP1P29466 404 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 PLTPP55058 493 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CCDC93Q567U6 631 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 KAT2BQ92831 832 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 RILPQ96NA2 401 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 FTCDO95954 541 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 FAM107AO95990 144 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 RXRBP28702 533 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 RPS6KA3P51812 740 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 LRRC14Q15048 493 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 Q4G0T1 1027 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 FAM81AQ8TBF8 368 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 TTC1Q99614 292 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 MST1RQ04912 1400 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 CCND1P24385 295 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CDC25AP30304 524 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
PRKN-206ENST00000366898 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 TPTE2Q6XPS3 522 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
PRKN-206ENST00000366898 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 TROVE2P10155 538 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■■■■■ 29.4
PRKN-206ENST00000366898 SCTRP47872 440 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 NME8Q8N427 588 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 DNAJC9Q8WXX5 260 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 SIKE1Q9BRV8 207 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 NWD1Q149M9 1564 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 JCADQ9P266 1359 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 RIMBP2O15034 1052 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 FOXN1O15353 648 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 TEX33O43247 280 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 AMPD3Q01432 767 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 DMPKQ09013 629 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 PTGISQ16647 500 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 GRAMD1BQ3KR37 738 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 PDE6CP51160 858 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 MFN1Q8IWA4 741 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.376e-17■■■■■ 149.9
PRKN-206ENST00000366898 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 ATP6V1G1O75348 118 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 COPB1P53618 953 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 KBTBD12Q3ZCT8 623 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 LRP10Q7Z4F1 713 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 OR2W6PQ8NHA6 318 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
PRKN-206ENST00000366898 CLMNQ96JQ2 1002 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 NFAT5O94916 1531 aa12.73□□□□□ -0.37
PRKN-206ENST00000366898 LTN1O94822 1766 aa12.72□□□□□ -0.37
PRKN-206ENST00000366898 WTIPA6NIX2 430 aaPredicted RBP12.72□□□□□ -0.37
PRKN-206ENST00000366898 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
PRKN-206ENST00000366898 FMR1NBQ8N0W7 255 aaPredicted RBP12.72□□□□□ -0.37
PRKN-206ENST00000366898 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
PRKN-206ENST00000366898 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms