RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 CYP2R1Q6VVX0 501 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 USP53Q70EK8 1073 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 FILIP1Q7Z7B0 1213 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 STAG1Q8WVM7 1258 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 DDX1Q92499 740 aaKnown RBP3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 JMJD8Q96S16 334 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 GPR20Q99678 358 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 SPC25Q9HBM1 224 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 NDOR1Q9UHB4 597 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 MAPRE3Q9UPY8 281 aa3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 TNPO3Q9Y5L0 923 aaKnown RBP3.5□□□□□ -1.85
RNU4-56P-201ENST00000364700 TRBV23OR9-2A0A075B6M9 112 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 K7ESM1 405 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PDE8AO60658 829 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 MSL3P1P0C860 447 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PAMP19021 973 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 KCNJ6P48051 423 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 SEPHS1P49903 392 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 CORO7P57737 925 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PUM1Q14671 1186 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 KIR3DS1Q14943 382 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PCBP1Q15365 356 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PLEKHN1Q494U1 663 aaPredicted RBP3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 IQCEQ6IPM2 695 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 ZC3H14Q6PJT7 736 aaKnown RBP3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 RPTNQ6XPR3 784 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 STRA8Q7Z7C7 330 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 CPNE8Q86YQ8 564 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PLEKHO2Q8TD55 490 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 DIO2Q92813 273 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 PCDHA9Q9Y5H5 950 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 COL4A3BPQ9Y5P4 624 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 X6R8D5 127 aa3.49□□□□□ -1.85
RNU4-56P-201ENST00000364700 NPHP3-ACAD11A0A0J9YXS1 232 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 TCRBV5S4A2TA0A5A2 114 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 TRAF5O00463 557 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 AQP7O14520 342 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 GLRX3O76003 335 aaKnown RBP3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 NPTXRO95502 500 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 MAGEA10P43363 369 aaPredicted RBP3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 NCKAP1LP55160 1127 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 MVKQ03426 396 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 ZNF827Q17R98 1081 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 VWA3BQ502W6 1294 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 UBXN11Q5T124 520 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 ZCCHC8Q6NZY4 707 aaKnown RBP3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 PKN3Q6P5Z2 889 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 LIPIQ6XZB0 460 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 OTOP1Q7RTM1 612 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 OVCH1Q7RTY7 1134 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 JAMLQ86YT9 394 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 IFNL3Q8IZI9 196 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 NUP43Q8NFH3 380 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 CDADC1Q9BWV3 514 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 CELF4Q9BZC1 486 aaKnown RBP3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 PDGFDQ9GZP0 370 aaPredicted RBP3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 PCDHA8Q9Y5H6 950 aa3.48□□□□□ -1.85
RNU4-56P-201ENST00000364700 SH3D21A4FU49 640 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 H7BY64 318 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 CBX4O00257 560 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 SRGAP3O43295 1099 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 AMY2AP04746 511 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 MYCLP1P12525 358 aaPredicted RBP3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 BPIP17213 487 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 AMY2BP19961 511 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 FBLN1P23142 703 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 IGFALSP35858 605 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 BCL6P41182 706 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 LIMS1P48059 325 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 CDKN1CP49918 316 aaPredicted RBP3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 ZNF200P98182 395 aaPredicted RBP3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 DSG1Q02413 1049 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 RNF187Q5TA31 235 aaPredicted RBP3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 FSTL4Q6MZW2 842 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 SAPCD2Q86UD0 394 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 RIOX2Q8IUF8 465 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 SH3RF2Q8TEC5 729 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 FNIP1Q8TF40 1166 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 RNF38Q9H0F5 515 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 CAAP1Q9H8G2 361 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 IPPKQ9H8X2 491 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 SMURF1Q9HCE7 757 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 USP40Q9NVE5 1235 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 IMPACTQ9P2X3 320 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 CBLCQ9ULV8 474 aa3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 NOP58Q9Y2X3 529 aaKnown RBP3.47□□□□□ -1.85
RNU4-56P-201ENST00000364700 ZNF561-AS1K7EIQ3 104 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 CLSTN1O94985 981 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 TBC1D8O95759 1140 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 SOD2P04179 222 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 CYBBP04839 570 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 ZBTB48P10074 688 aaPredicted RBP3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 GLI4P10075 376 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 NCLP19338 710 aaKnown RBP3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 TNFRSF1AP19438 455 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 HTRA3P83110 453 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 LACTBP83111 547 aaPredicted RBP3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 GUCY1A3Q02108 690 aa3.46□□□□□ -1.86
RNU4-56P-201ENST00000364700 LSAMPQ13449 338 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms