RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 FBXO22Q8NEZ5 403 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 SMARCC2Q8TAQ2 1214 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 CYP2W1Q8TAV3 490 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 FEZF2Q8TBJ5 459 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 PHOSPHO2Q8TCD6 241 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 MORC4Q8TE76 937 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 NSUN6Q8TEA1 469 aaKnown RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 SCFD2Q8WU76 684 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRAPPC12Q8WVT3 735 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 DNAJB3Q8WWF6 145 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 ESR2Q92731 530 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 ATP6V0A1Q93050 837 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 SNX21Q969T3 373 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRIM44Q96DX7 344 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 PGBD1Q96JS3 809 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 RPGRIP1Q96KN7 1286 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TCEANC2Q96MN5 208 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TTC14Q96N46 770 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TGS1Q96RS0 853 aaKnown RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZSCAN10Q96SZ4 725 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 YME1L1Q96TA2 773 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 RAD9AQ99638 391 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 LARP6Q9BRS8 491 aaKnown RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 UBAC1Q9BSL1 405 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 C16orf70Q9BSU1 422 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 FAM49AQ9H0Q0 323 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 RNPEPQ9H4A4 650 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 UBE2ZQ9H832 354 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 CDHR5Q9HBB8 845 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 C11orf16Q9NQ32 467 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 PXMP2Q9NR77 195 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 DIAPH3Q9NSV4 1193 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 TCP11L1Q9NUJ3 509 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 FAM86C1Q9NVL1 165 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 CLDND1Q9NY35 253 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 GTF2IRD1Q9UHL9 959 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 MAD2L2Q9UI95 211 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 CDH22Q9UJ99 828 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 ANAPC4Q9UJX5 808 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 CIZ1Q9ULV3 898 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 NAP1L2Q9ULW6 460 aaPredicted RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 MRPL11Q9Y3B7 192 aaKnown RBP1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 Q9Y3F1 56 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 HCN4Q9Y3Q4 1203 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 PCDHA1Q9Y5I3 950 aa1.78□□□□□ -2.12
RNU1-42P-201ENST00000364033 BAZ2AQ9UIF9 1905 aaKnown RBP1.78□□□□□ -2.13
RNU1-42P-201ENST00000364033 LAMA2P24043 3122 aaKnown RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 ATAD5Q96QE3 1844 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 LOC285556D6RIA3 1793 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 NCOR1O75376 2440 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 ABCB11O95342 1321 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 RAD50Q92878 1312 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 SALL3Q9BXA9 1300 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 ABHD14A-ACY1A0A1B0GW23 586 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 GSTTP1A0A1W2PQM5 241 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 POTEB3A0JP26 581 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PALM3A6NDB9 673 aaPredicted RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 GRXCR2A6NFK2 248 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 TBKBP1A7MCY6 615 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 DDX11L8A8MPP1 907 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 B4DLN1 442 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 SPATA31C2B4DYI2 1134 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 NT5C1B-RDH14C9J2C7 533 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 E7EWF7 191 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PI4K2BG5E9Z4 385 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 H3BRB1 525 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 GCOM1H8Y6P7 765 aaPredicted RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 STXBP3O00186 592 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 HAS3O00219 553 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 NOP56O00567 594 aaKnown RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 ZBTB5O15062 677 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 ADAMTS3O15072 1205 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 NKRFO15226 690 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CYTH3O43739 400 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 KPNA6O60684 536 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 GPR37L1O60883 481 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PPFIA4O75335 1185 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CSDE1O75534 798 aaKnown RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 REC8O95072 547 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 LETM1O95202 739 aaPredicted RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 GJB5O95377 273 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 PLEKHA8P1O95397 391 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CXCL10P02778 98 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 LGALS2P05162 132 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CYP21A2P08686 494 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 FGRP09769 529 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 POLR2MP0CAP2 368 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 SNHG28P0DPA3 235 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CPA1P15085 419 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 UBA1P22314 1058 aaKnown RBP1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 FGFR4P22455 802 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 EDNRBP24530 442 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CCND2P30279 289 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CD52P31358 61 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 CTNNB1P35222 781 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 RFC2P35250 354 aa1.77□□□□□ -2.13
RNU1-42P-201ENST00000364033 BMPR1AP36894 532 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms