RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 SRSF7Q16629 238 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 CDCA8Q53HL2 280 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 AMER1Q5JTC6 1135 aaPredicted RBP1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 TMEM201Q5SNT2 666 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 FKBP15Q5T1M5 1219 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 KIAA1614Q5VZ46 1190 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 SPTY2D1Q68D10 685 aaPredicted RBP1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 CWF19L1Q69YN2 538 aaKnown RBP1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 PTCHD1Q96NR3 888 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 GFOD1Q9NXC2 390 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 KLHL3Q9UH77 587 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 ZMIZ1Q9ULJ6 1067 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 PTPN22Q9Y2R2 807 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 HS3ST4Q9Y661 456 aa1.39□□□□□ -2.19
RNU6-228P-201ENST00000362700 GSTT1P30711 240 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 AVPR1BP47901 424 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 SCNN1GP51170 649 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 RBM10P98175 930 aaKnown RBP1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 TROAPQ12815 778 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 ZMAT1Q5H9K5 638 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 NBPF12Q5TAG4 269 aaPredicted RBP1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 AWAT2Q6E213 333 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 C11orf87Q6NUJ2 197 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 MEPCEQ7L2J0 689 aaKnown RBP1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 ANKRD35Q8N283 1001 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 STK32AQ8WU08 396 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 NR4A3Q92570 626 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 POM121Q96HA1 1249 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 CARD11Q9BXL7 1154 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 KATNBL1Q9H079 304 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 NELFAQ9H3P2 528 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 TLK1Q9UKI8 766 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 PROCRQ9UNN8 238 aa1.38□□□□□ -2.19
RNU6-228P-201ENST00000362700 PRSS44E7EML9 344 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 CHGBP05060 677 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 MAN2A2P49641 1150 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 OCA2Q04671 838 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 SMAD2Q15796 467 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 NXPE4Q6UWF7 544 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 MILR1Q7Z6M3 343 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 TMPRSS12Q86WS5 348 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 RBMXL3Q8N7X1 1067 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 CAGE1Q8TC20 777 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 CLP1Q92989 425 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 FUBP1Q96AE4 644 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 MTA3Q9BTC8 594 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 DSCC1Q9BVC3 393 aa1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 HIRIP3Q9BW71 556 aaPredicted RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 RTN4Q9NQC3 1192 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 PUF60Q9UHX1 559 aaKnown RBP1.37□□□□□ -2.19
RNU6-228P-201ENST00000362700 CHURC1-FNTBB4DL54 471 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 MATN2O00339 956 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 TP73O15350 636 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 SGSM2O43147 1006 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 CKMP06732 381 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 ATP2B4P23634 1241 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 NOP2P46087 812 aaKnown RBP1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 ELOAQ14241 798 aaKnown RBP1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 TIGD2Q4W5G0 525 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 RABL3Q5HYI8 236 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 Q6ZRM9 215 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 BMP8AQ7Z5Y6 402 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 SEC14L1Q92503 715 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 CAVIN3Q969G5 261 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 TOE1Q96GM8 510 aaKnown RBP1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 ERRFI1Q9UJM3 462 aaPredicted RBP1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 FBXL21Q9UKT6 434 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 MMP24Q9Y5R2 645 aa1.36□□□□□ -2.19
RNU6-228P-201ENST00000362700 RGS13O14921 159 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 RPL6Q02878 288 aaKnown RBP1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 NOLC1Q14978 699 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 GFI1BQ5VTD9 330 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 NPNTQ6UXI9 565 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 VSIG10Q8N0Z9 540 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 LCORLQ8N3X6 602 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 TMEM176AQ96HP8 235 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 DUSP26Q9BV47 211 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 SRRTQ9BXP5 876 aaKnown RBP1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 KIAA1586Q9HCI6 787 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 GULP1Q9UBP9 304 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 PCDHB12Q9Y5F1 795 aa1.35□□□□□ -2.19
RNU6-228P-201ENST00000362700 A0A1B0GVY2 172 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 TBC1D4O60343 1298 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 FBXO21O94952 628 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 KNG1P01042 644 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 ZEB1P37275 1124 aaPredicted RBP1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 RAD51AP2Q09MP3 1159 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 SF3B4Q15427 424 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 PLEKHG4Q58EX7 1191 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 LCE1FQ5T754 118 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 TTBK2Q6IQ55 1244 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 TMC5Q6UXY8 1006 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 ARHGEF25Q86VW2 580 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 MPHOSPH9Q99550 1183 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 EBF3Q9H4W6 596 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 PRR13Q9NZ81 148 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 ASH2LQ9UBL3 628 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 BRPF3Q9ULD4 1205 aa1.34□□□□□ -2.19
RNU6-228P-201ENST00000362700 ICKQ9UPZ9 632 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms