RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 EMC4Q5J8M3 183 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 CYP4F22Q6NT55 531 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 VSIG10LQ86VR7 867 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 DTX1Q86Y01 620 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 NOSTRINQ8IVI9 506 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 UHMK1Q8TAS1 419 aaKnown RBP5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 IMPACTQ9P2X3 320 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 FBLN5Q9UBX5 448 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 TRHDEQ9UKU6 1024 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 SRPK3Q9UPE1 567 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 FAN1Q9Y2M0 1017 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 SPO11Q9Y5K1 396 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 TAF6LQ9Y6J9 622 aa5.07□□□□□ -1.6
RNU6-28P-201ENST00000362378 FITM1A5D6W6 292 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 DVL2O14641 736 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 CLASP2O75122 1294 aaKnown RBP5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 FBXO21O94952 628 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 MED26O95402 600 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 MSL3P1P0C860 447 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 KRT15P19012 456 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SPINK2P20155 84 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 FUT4P22083 530 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC6A11P48066 632 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 ERVK-21P61565 698 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 PHC1P78364 1004 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 INAVAQ3KP66 663 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 FIGNQ5HY92 759 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 GPR158Q5T848 1215 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC23A3Q6PIS1 610 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 ZNF574Q6ZN55 896 aaPredicted RBP5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 NFXL1Q6ZNB6 911 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 PTRH1Q86Y79 214 aaKnown RBP5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 PASD1Q8IV76 773 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 NLGN4XQ8N0W4 816 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 OXR1Q8N573 874 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 PIP4K2CQ8TBX8 421 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 DLG3Q92796 817 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC5A5Q92911 643 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 CHMP4CQ96CF2 233 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 PDGFDQ9GZP0 370 aaPredicted RBP5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SEMA6BQ9H3T3 888 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 SP110Q9HB58 689 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 H2AFY2Q9P0M6 372 aaPredicted RBP5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 CCDC39Q9UFE4 941 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 DSEQ9UL01 958 aa5.06□□□□□ -1.6
RNU6-28P-201ENST00000362378 A0A1W2PQ27 194 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 A0A1W2PQ64 194 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 A0A1W2PQC6 194 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 A0A1W2PQD8 194 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 KIAA1324LA8MWY0 1029 aaPredicted RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 KRIT1O00522 736 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 TSPAN6O43657 245 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 TADA3O75528 432 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 HPXP02790 462 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 FURINP09958 794 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 CD97P48960 835 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 HK2P52789 917 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 EPHA5P54756 1037 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 SMAD3P84022 425 aaKnown RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 IRF9Q00978 393 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 TERF2Q15554 542 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 ZNF174Q15697 407 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 SMAD2Q15796 467 aaKnown RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 CHRNA2Q15822 529 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 RGL3Q3MIN7 710 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 FSTL4Q6MZW2 842 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 CBARPQ8N350 705 aaPredicted RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 KIAA1958Q8N8K9 716 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 CLRN3Q8NCR9 226 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 NUP43Q8NFH3 380 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 USP33Q8TEY7 942 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 CAMKK2Q96RR4 588 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 PLCD4Q9BRC7 762 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 YIPF4Q9BSR8 244 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 VTA1Q9NP79 307 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 PAK6Q9NQU5 681 aaPredicted RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 GEMIN8Q9NWZ8 242 aaKnown RBP5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 NUB1Q9Y5A7 615 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 B3GALT1Q9Y5Z6 326 aa5.05□□□□□ -1.6
RNU6-28P-201ENST00000362378 TNKSO95271 1327 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 AKAP10O43572 662 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 MAFKO60675 156 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 KRT37O76014 449 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 EFEMP2O95967 443 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 NTRK1P04629 796 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 GLI4P10075 376 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 PRKCAP17252 672 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 LSP1P33241 339 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 GDNFP39905 211 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 RAB27AP51159 221 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 KIR3DS1Q14943 382 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 DDB1Q16531 1140 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 BROXQ5VW32 411 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 STEAP3Q658P3 488 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 CC2D1AQ6P1N0 951 aaPredicted RBP5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 HDGFL2Q7Z4V5 671 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms