RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 NIPA1Q7RTP0 329 aa20.27■□□□□ 0.84
CLK2-202ENST00000361168 XPNPEP3Q9NQH7 507 aa20.27■□□□□ 0.84
CLK2-202ENST00000361168 ADAMTS4O75173 837 aa20.27■□□□□ 0.84
CLK2-202ENST00000361168 DUSP11O75319 330 aaKnown RBP20.27■□□□□ 0.84
CLK2-202ENST00000361168 CCNE2O96020 404 aa20.27■□□□□ 0.84
CLK2-202ENST00000361168 GCFC2P16383 781 aaKnown RBP20.27■□□□□ 0.84
CLK2-202ENST00000361168 SETQ01105 290 aaPredicted RBP20.27■□□□□ 0.84
CLK2-202ENST00000361168 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.84
CLK2-202ENST00000361168 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
CLK2-202ENST00000361168 MTMR9Q96QG7 549 aa20.27■□□□□ 0.84
CLK2-202ENST00000361168 MAFGO15525 162 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 IL17AQ16552 155 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 CALCRLQ16602 461 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 DHX37Q8IY37 1157 aaKnown RBP20.26■□□□□ 0.83
CLK2-202ENST00000361168 OR6J1Q8NGC5 347 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 AFG1LQ8WV93 481 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 SLC5A5Q92911 643 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 SENP7Q9BQF6 1050 aa20.26■□□□□ 0.83
CLK2-202ENST00000361168 PSMD10O75832 226 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 C6orf222P0C671 652 aaPredicted RBP20.25■□□□□ 0.83
CLK2-202ENST00000361168 TXKP42681 527 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 U2AF1L4Q8WU68 220 aaKnown RBP20.25■□□□□ 0.83
CLK2-202ENST00000361168 CDHR1Q96JP9 859 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 MLXIPQ9HAP2 919 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 CHMP2AO43633 222 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 KCNV1Q6PIU1 500 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 SPATA33Q96N06 139 aa20.25■□□□□ 0.83
CLK2-202ENST00000361168 GH1P01241 217 aa20.24■□□□□ 0.83
CLK2-202ENST00000361168 GJB1P08034 283 aa20.24■□□□□ 0.83
CLK2-202ENST00000361168 LRCH2Q5VUJ6 765 aa20.24■□□□□ 0.83
CLK2-202ENST00000361168 METTL7BQ6UX53 244 aa20.24■□□□□ 0.83
CLK2-202ENST00000361168 ABHD8Q96I13 439 aa20.24■□□□□ 0.83
CLK2-202ENST00000361168 JPH1Q9HDC5 661 aaPredicted RBP20.24■□□□□ 0.83
CLK2-202ENST00000361168 PDIA4P13667 645 aaKnown RBP20.23■□□□□ 0.83
CLK2-202ENST00000361168 GJA9P57773 515 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 GRIN1Q05586 938 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 NEDD9Q14511 834 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 PTPAQ15257 358 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 UNC45AQ9H3U1 944 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 TTC12Q9H892 705 aaPredicted RBP20.23■□□□□ 0.83
CLK2-202ENST00000361168 VAV3Q9UKW4 847 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 GAS7O60861 476 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 SGPL1O95470 568 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 NUCB2P80303 420 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 SPIRE1Q08AE8 756 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 GNASQ5JWF2 1037 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 TRIM50Q86XT4 487 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 GPR20Q99678 358 aa20.23■□□□□ 0.83
CLK2-202ENST00000361168 GSTTP1A0A1W2PQM5 241 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 EML1O00423 815 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 OR52Z1P0C646 297 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 MARCKSP29966 332 aaPredicted RBP20.22■□□□□ 0.83
CLK2-202ENST00000361168 TECP42680 631 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 LRRC41Q15345 812 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 FSCN1Q16658 493 aaKnown RBP20.22■□□□□ 0.83
CLK2-202ENST00000361168 B3GNT9Q6UX72 402 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
CLK2-202ENST00000361168 SDF4Q9BRK5 362 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 SLC9A2Q9UBY0 812 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 OGDHLQ9ULD0 1010 aa20.22■□□□□ 0.83
CLK2-202ENST00000361168 POTEMA6NI47 508 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 A6NJR5 290 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 MARCH6O60337 910 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 MSCO60682 206 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 MMP3P08254 477 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 EN2P19622 333 aaPredicted RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 MNX1P50219 401 aaPredicted RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 ACTR2P61160 394 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 ATP2C1P98194 919 aaPredicted RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 LAMC2Q13753 1193 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 CCSAPQ6IQ19 270 aaPredicted RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 TNS4Q8IZW8 715 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 KLHDC9Q8NEP7 349 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 CRISPLD2Q9H0B8 497 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 AP5M1Q9H0R1 490 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 UPF3AQ9H1J1 476 aaKnown RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 TBC1D22BQ9NU19 505 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 PCDHA12Q9UN75 941 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 NFASCO94856 1347 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 NKRFO15226 690 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLK2-202ENST00000361168 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 ZNF286BP0CG31 522 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 CDC25AP30304 524 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 GJA8P48165 433 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 KCNA10Q16322 511 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 PPTC7Q8NI37 304 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 DIS3LQ8TF46 1054 aaKnown RBP20.21■□□□□ 0.83
CLK2-202ENST00000361168 FAM20AQ96MK3 541 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 RIT2Q99578 217 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 GDPD2Q9HCC8 539 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
CLK2-202ENST00000361168 TBX3O15119 743 aa20.2■□□□□ 0.82
CLK2-202ENST00000361168 TCF7P36402 384 aaPredicted RBP20.2■□□□□ 0.82
CLK2-202ENST00000361168 CXCL17Q6UXB2 119 aa20.2■□□□□ 0.82
CLK2-202ENST00000361168 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
CLK2-202ENST00000361168 Q9Y3F1 56 aa20.2■□□□□ 0.82
CLK2-202ENST00000361168 FRMPD3Q5JV73 1810 aa20.2■□□□□ 0.82
CLK2-202ENST00000361168 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms